Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5741 | 17446;17447;17448 | chr2:178731545;178731544;178731543 | chr2:179596272;179596271;179596270 |
N2AB | 5424 | 16495;16496;16497 | chr2:178731545;178731544;178731543 | chr2:179596272;179596271;179596270 |
N2A | 4497 | 13714;13715;13716 | chr2:178731545;178731544;178731543 | chr2:179596272;179596271;179596270 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs794729614 | None | 0.996 | N | 0.57 | 0.275 | 0.5073929853 | gnomAD-4.0.0 | 2.05619E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.7021E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0815 | likely_benign | 0.0841 | benign | -0.959 | Destabilizing | 0.061 | N | 0.135 | neutral | N | 0.418307099 | None | None | N |
S/C | 0.1034 | likely_benign | 0.0999 | benign | -0.67 | Destabilizing | 0.996 | D | 0.57 | neutral | N | 0.495135874 | None | None | N |
S/D | 0.7787 | likely_pathogenic | 0.8017 | pathogenic | -0.141 | Destabilizing | 0.969 | D | 0.527 | neutral | None | None | None | None | N |
S/E | 0.7857 | likely_pathogenic | 0.797 | pathogenic | -0.151 | Destabilizing | 0.969 | D | 0.481 | neutral | None | None | None | None | N |
S/F | 0.2649 | likely_benign | 0.292 | benign | -1.277 | Destabilizing | 0.976 | D | 0.611 | neutral | N | 0.495135874 | None | None | N |
S/G | 0.1743 | likely_benign | 0.1957 | benign | -1.167 | Destabilizing | 0.863 | D | 0.419 | neutral | None | None | None | None | N |
S/H | 0.5667 | likely_pathogenic | 0.5975 | pathogenic | -1.639 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
S/I | 0.1562 | likely_benign | 0.168 | benign | -0.508 | Destabilizing | 0.759 | D | 0.495 | neutral | None | None | None | None | N |
S/K | 0.9012 | likely_pathogenic | 0.9206 | pathogenic | -0.554 | Destabilizing | 0.969 | D | 0.481 | neutral | None | None | None | None | N |
S/L | 0.1219 | likely_benign | 0.1413 | benign | -0.508 | Destabilizing | 0.02 | N | 0.323 | neutral | None | None | None | None | N |
S/M | 0.2509 | likely_benign | 0.2758 | benign | -0.154 | Destabilizing | 0.982 | D | 0.61 | neutral | None | None | None | None | N |
S/N | 0.3407 | ambiguous | 0.3916 | ambiguous | -0.466 | Destabilizing | 0.99 | D | 0.533 | neutral | None | None | None | None | N |
S/P | 0.8163 | likely_pathogenic | 0.835 | pathogenic | -0.629 | Destabilizing | 0.988 | D | 0.626 | neutral | D | 0.525285423 | None | None | N |
S/Q | 0.7181 | likely_pathogenic | 0.7432 | pathogenic | -0.704 | Destabilizing | 0.997 | D | 0.567 | neutral | None | None | None | None | N |
S/R | 0.823 | likely_pathogenic | 0.8574 | pathogenic | -0.469 | Destabilizing | 0.991 | D | 0.619 | neutral | None | None | None | None | N |
S/T | 0.0947 | likely_benign | 0.0996 | benign | -0.585 | Destabilizing | 0.826 | D | 0.433 | neutral | N | 0.41013312 | None | None | N |
S/V | 0.1433 | likely_benign | 0.1523 | benign | -0.629 | Destabilizing | 0.079 | N | 0.311 | neutral | None | None | None | None | N |
S/W | 0.5421 | ambiguous | 0.5816 | pathogenic | -1.164 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
S/Y | 0.2552 | likely_benign | 0.2842 | benign | -0.91 | Destabilizing | 0.996 | D | 0.61 | neutral | D | 0.524938706 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.