Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5751 | 17476;17477;17478 | chr2:178731515;178731514;178731513 | chr2:179596242;179596241;179596240 |
N2AB | 5434 | 16525;16526;16527 | chr2:178731515;178731514;178731513 | chr2:179596242;179596241;179596240 |
N2A | 4507 | 13744;13745;13746 | chr2:178731515;178731514;178731513 | chr2:179596242;179596241;179596240 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs759726984 | -1.333 | 0.505 | N | 0.726 | 0.113 | 0.143124449307 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.92E-06 | 0 |
A/T | rs759726984 | -1.333 | 0.505 | N | 0.726 | 0.113 | 0.143124449307 | gnomAD-4.0.0 | 6.84399E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59846E-06 | 4.63833E-05 | 3.31444E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5227 | ambiguous | 0.4559 | ambiguous | -1.064 | Destabilizing | 0.01 | N | 0.435 | neutral | None | None | None | None | N |
A/D | 0.9779 | likely_pathogenic | 0.9696 | pathogenic | -2.403 | Highly Destabilizing | 0.782 | D | 0.864 | deleterious | N | 0.506965368 | None | None | N |
A/E | 0.9731 | likely_pathogenic | 0.9602 | pathogenic | -2.195 | Highly Destabilizing | 0.906 | D | 0.818 | deleterious | None | None | None | None | N |
A/F | 0.9195 | likely_pathogenic | 0.9042 | pathogenic | -0.621 | Destabilizing | 0.967 | D | 0.893 | deleterious | None | None | None | None | N |
A/G | 0.1786 | likely_benign | 0.1732 | benign | -1.521 | Destabilizing | 0.001 | N | 0.395 | neutral | N | 0.450765369 | None | None | N |
A/H | 0.9876 | likely_pathogenic | 0.9826 | pathogenic | -2.041 | Highly Destabilizing | 0.991 | D | 0.883 | deleterious | None | None | None | None | N |
A/I | 0.7196 | likely_pathogenic | 0.715 | pathogenic | 0.293 | Stabilizing | 0.826 | D | 0.818 | deleterious | None | None | None | None | N |
A/K | 0.995 | likely_pathogenic | 0.992 | pathogenic | -1.164 | Destabilizing | 0.826 | D | 0.821 | deleterious | None | None | None | None | N |
A/L | 0.6631 | likely_pathogenic | 0.6258 | pathogenic | 0.293 | Stabilizing | 0.404 | N | 0.817 | deleterious | None | None | None | None | N |
A/M | 0.7089 | likely_pathogenic | 0.6914 | pathogenic | 0.029 | Stabilizing | 0.991 | D | 0.804 | deleterious | None | None | None | None | N |
A/N | 0.9362 | likely_pathogenic | 0.9181 | pathogenic | -1.483 | Destabilizing | 0.826 | D | 0.879 | deleterious | None | None | None | None | N |
A/P | 0.9896 | likely_pathogenic | 0.9838 | pathogenic | -0.104 | Destabilizing | 0.879 | D | 0.817 | deleterious | N | 0.506965368 | None | None | N |
A/Q | 0.9726 | likely_pathogenic | 0.9622 | pathogenic | -1.268 | Destabilizing | 0.906 | D | 0.803 | deleterious | None | None | None | None | N |
A/R | 0.9883 | likely_pathogenic | 0.9812 | pathogenic | -1.289 | Destabilizing | 0.906 | D | 0.806 | deleterious | None | None | None | None | N |
A/S | 0.2192 | likely_benign | 0.2349 | benign | -1.875 | Destabilizing | 0.338 | N | 0.679 | prob.neutral | N | 0.444666116 | None | None | N |
A/T | 0.2045 | likely_benign | 0.1928 | benign | -1.541 | Destabilizing | 0.505 | D | 0.726 | prob.delet. | N | 0.469004413 | None | None | N |
A/V | 0.3282 | likely_benign | 0.3153 | benign | -0.104 | Destabilizing | 0.505 | D | 0.718 | prob.delet. | N | 0.447298202 | None | None | N |
A/W | 0.9919 | likely_pathogenic | 0.9899 | pathogenic | -1.47 | Destabilizing | 0.991 | D | 0.895 | deleterious | None | None | None | None | N |
A/Y | 0.9662 | likely_pathogenic | 0.9548 | pathogenic | -0.881 | Destabilizing | 0.967 | D | 0.896 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.