Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5759 | 17500;17501;17502 | chr2:178731491;178731490;178731489 | chr2:179596218;179596217;179596216 |
N2AB | 5442 | 16549;16550;16551 | chr2:178731491;178731490;178731489 | chr2:179596218;179596217;179596216 |
N2A | 4515 | 13768;13769;13770 | chr2:178731491;178731490;178731489 | chr2:179596218;179596217;179596216 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1365586736 | -1.275 | 0.267 | N | 0.395 | 0.093 | 0.388174495139 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs1365586736 | -1.275 | 0.267 | N | 0.395 | 0.093 | 0.388174495139 | gnomAD-4.0.0 | 2.73715E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73551E-04 | 1.79901E-06 | 1.15939E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7963 | likely_pathogenic | 0.7901 | pathogenic | -2.489 | Highly Destabilizing | 0.688 | D | 0.429 | neutral | None | None | None | None | I |
I/C | 0.9351 | likely_pathogenic | 0.9299 | pathogenic | -1.781 | Destabilizing | 0.998 | D | 0.545 | neutral | None | None | None | None | I |
I/D | 0.9904 | likely_pathogenic | 0.9902 | pathogenic | -2.331 | Highly Destabilizing | 0.974 | D | 0.613 | neutral | None | None | None | None | I |
I/E | 0.9756 | likely_pathogenic | 0.9747 | pathogenic | -2.156 | Highly Destabilizing | 0.974 | D | 0.619 | neutral | None | None | None | None | I |
I/F | 0.4517 | ambiguous | 0.4465 | ambiguous | -1.52 | Destabilizing | 0.934 | D | 0.533 | neutral | D | 0.536059777 | None | None | I |
I/G | 0.9701 | likely_pathogenic | 0.9685 | pathogenic | -3.006 | Highly Destabilizing | 0.974 | D | 0.618 | neutral | None | None | None | None | I |
I/H | 0.9704 | likely_pathogenic | 0.9703 | pathogenic | -2.342 | Highly Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | I |
I/K | 0.9429 | likely_pathogenic | 0.9471 | pathogenic | -1.868 | Destabilizing | 0.974 | D | 0.621 | neutral | None | None | None | None | I |
I/L | 0.1664 | likely_benign | 0.1587 | benign | -1.026 | Destabilizing | 0.005 | N | 0.108 | neutral | N | 0.458500283 | None | None | I |
I/M | 0.1551 | likely_benign | 0.1469 | benign | -0.93 | Destabilizing | 0.136 | N | 0.294 | neutral | N | 0.48380416 | None | None | I |
I/N | 0.9035 | likely_pathogenic | 0.8989 | pathogenic | -2.014 | Highly Destabilizing | 0.989 | D | 0.631 | neutral | N | 0.500949882 | None | None | I |
I/P | 0.9255 | likely_pathogenic | 0.9352 | pathogenic | -1.491 | Destabilizing | 0.016 | N | 0.363 | neutral | None | None | None | None | I |
I/Q | 0.946 | likely_pathogenic | 0.9446 | pathogenic | -1.957 | Destabilizing | 0.974 | D | 0.629 | neutral | None | None | None | None | I |
I/R | 0.919 | likely_pathogenic | 0.9248 | pathogenic | -1.496 | Destabilizing | 0.974 | D | 0.631 | neutral | None | None | None | None | I |
I/S | 0.8893 | likely_pathogenic | 0.8854 | pathogenic | -2.774 | Highly Destabilizing | 0.891 | D | 0.528 | neutral | N | 0.500442903 | None | None | I |
I/T | 0.86 | likely_pathogenic | 0.8609 | pathogenic | -2.452 | Highly Destabilizing | 0.891 | D | 0.526 | neutral | N | 0.489086598 | None | None | I |
I/V | 0.088 | likely_benign | 0.0872 | benign | -1.491 | Destabilizing | 0.267 | N | 0.395 | neutral | N | 0.5127402 | None | None | I |
I/W | 0.9686 | likely_pathogenic | 0.971 | pathogenic | -1.803 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | I |
I/Y | 0.887 | likely_pathogenic | 0.8897 | pathogenic | -1.545 | Destabilizing | 0.974 | D | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.