Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5761 | 17506;17507;17508 | chr2:178731485;178731484;178731483 | chr2:179596212;179596211;179596210 |
N2AB | 5444 | 16555;16556;16557 | chr2:178731485;178731484;178731483 | chr2:179596212;179596211;179596210 |
N2A | 4517 | 13774;13775;13776 | chr2:178731485;178731484;178731483 | chr2:179596212;179596211;179596210 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.78 | D | 0.636 | 0.686 | 0.760823172197 | gnomAD-4.0.0 | 4.78995E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49747E-06 | 0 | 3.31367E-05 |
V/L | None | None | 0.64 | D | 0.491 | 0.421 | 0.61844985043 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6634 | likely_pathogenic | 0.6177 | pathogenic | -1.588 | Destabilizing | 0.78 | D | 0.636 | neutral | D | 0.571996119 | None | None | I |
V/C | 0.9496 | likely_pathogenic | 0.9455 | pathogenic | -0.963 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
V/D | 0.9909 | likely_pathogenic | 0.9858 | pathogenic | -1.505 | Destabilizing | 0.952 | D | 0.821 | deleterious | None | None | None | None | I |
V/E | 0.9716 | likely_pathogenic | 0.9619 | pathogenic | -1.421 | Destabilizing | 0.103 | N | 0.595 | neutral | D | 0.589024501 | None | None | I |
V/F | 0.599 | likely_pathogenic | 0.5914 | pathogenic | -1.08 | Destabilizing | 0.976 | D | 0.744 | deleterious | None | None | None | None | I |
V/G | 0.8833 | likely_pathogenic | 0.8495 | pathogenic | -1.999 | Destabilizing | 0.984 | D | 0.821 | deleterious | D | 0.589024501 | None | None | I |
V/H | 0.9895 | likely_pathogenic | 0.9871 | pathogenic | -1.629 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | I |
V/I | 0.088 | likely_benign | 0.0963 | benign | -0.518 | Destabilizing | 0.015 | N | 0.226 | neutral | None | None | None | None | I |
V/K | 0.9781 | likely_pathogenic | 0.971 | pathogenic | -1.254 | Destabilizing | 0.976 | D | 0.825 | deleterious | None | None | None | None | I |
V/L | 0.4737 | ambiguous | 0.4991 | ambiguous | -0.518 | Destabilizing | 0.64 | D | 0.491 | neutral | D | 0.57578879 | None | None | I |
V/M | 0.3663 | ambiguous | 0.3775 | ambiguous | -0.38 | Destabilizing | 0.968 | D | 0.609 | neutral | D | 0.55658217 | None | None | I |
V/N | 0.9665 | likely_pathogenic | 0.952 | pathogenic | -1.168 | Destabilizing | 0.988 | D | 0.859 | deleterious | None | None | None | None | I |
V/P | 0.9759 | likely_pathogenic | 0.9644 | pathogenic | -0.841 | Destabilizing | 0.996 | D | 0.851 | deleterious | None | None | None | None | I |
V/Q | 0.9705 | likely_pathogenic | 0.9629 | pathogenic | -1.208 | Destabilizing | 0.976 | D | 0.851 | deleterious | None | None | None | None | I |
V/R | 0.9714 | likely_pathogenic | 0.9629 | pathogenic | -0.901 | Destabilizing | 0.976 | D | 0.858 | deleterious | None | None | None | None | I |
V/S | 0.8877 | likely_pathogenic | 0.8601 | pathogenic | -1.748 | Destabilizing | 0.919 | D | 0.822 | deleterious | None | None | None | None | I |
V/T | 0.6552 | likely_pathogenic | 0.5761 | pathogenic | -1.535 | Destabilizing | 0.919 | D | 0.633 | neutral | None | None | None | None | I |
V/W | 0.9901 | likely_pathogenic | 0.9894 | pathogenic | -1.408 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | I |
V/Y | 0.9572 | likely_pathogenic | 0.951 | pathogenic | -1.052 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.