Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5772 | 17539;17540;17541 | chr2:178731452;178731451;178731450 | chr2:179596179;179596178;179596177 |
N2AB | 5455 | 16588;16589;16590 | chr2:178731452;178731451;178731450 | chr2:179596179;179596178;179596177 |
N2A | 4528 | 13807;13808;13809 | chr2:178731452;178731451;178731450 | chr2:179596179;179596178;179596177 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs763931240 | 0.833 | 0.994 | D | 0.49 | 0.32 | 0.483816155017 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs763931240 | 0.833 | 0.994 | D | 0.49 | 0.32 | 0.483816155017 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs763931240 | 0.833 | 0.994 | D | 0.49 | 0.32 | 0.483816155017 | gnomAD-4.0.0 | 2.56244E-06 | None | None | None | None | I | None | 0 | 3.39098E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1365 | likely_benign | 0.1443 | benign | -0.523 | Destabilizing | 0.989 | D | 0.494 | neutral | N | 0.497696177 | None | None | I |
E/C | 0.9035 | likely_pathogenic | 0.909 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
E/D | 0.1936 | likely_benign | 0.2074 | benign | -0.584 | Destabilizing | 0.217 | N | 0.315 | neutral | N | 0.481420002 | None | None | I |
E/F | 0.846 | likely_pathogenic | 0.8718 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | I |
E/G | 0.1459 | likely_benign | 0.1598 | benign | -0.784 | Destabilizing | 0.994 | D | 0.445 | neutral | D | 0.522882623 | None | None | I |
E/H | 0.5883 | likely_pathogenic | 0.6248 | pathogenic | -0.235 | Destabilizing | 1.0 | D | 0.463 | neutral | None | None | None | None | I |
E/I | 0.4798 | ambiguous | 0.5319 | ambiguous | 0.154 | Stabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | I |
E/K | 0.1279 | likely_benign | 0.1476 | benign | 0.003 | Stabilizing | 0.994 | D | 0.49 | neutral | D | 0.525709497 | None | None | I |
E/L | 0.4894 | ambiguous | 0.5336 | ambiguous | 0.154 | Stabilizing | 0.998 | D | 0.533 | neutral | None | None | None | None | I |
E/M | 0.5299 | ambiguous | 0.5722 | pathogenic | 0.355 | Stabilizing | 1.0 | D | 0.559 | neutral | None | None | None | None | I |
E/N | 0.3484 | ambiguous | 0.3597 | ambiguous | -0.356 | Destabilizing | 0.998 | D | 0.436 | neutral | None | None | None | None | I |
E/P | 0.4364 | ambiguous | 0.454 | ambiguous | -0.05 | Destabilizing | 1.0 | D | 0.498 | neutral | None | None | None | None | I |
E/Q | 0.1622 | likely_benign | 0.1761 | benign | -0.281 | Destabilizing | 0.998 | D | 0.443 | neutral | N | 0.499581689 | None | None | I |
E/R | 0.2529 | likely_benign | 0.2797 | benign | 0.248 | Stabilizing | 0.999 | D | 0.472 | neutral | None | None | None | None | I |
E/S | 0.224 | likely_benign | 0.2367 | benign | -0.55 | Destabilizing | 0.983 | D | 0.473 | neutral | None | None | None | None | I |
E/T | 0.2635 | likely_benign | 0.2871 | benign | -0.34 | Destabilizing | 0.784 | D | 0.353 | neutral | None | None | None | None | I |
E/V | 0.27 | likely_benign | 0.2986 | benign | -0.05 | Destabilizing | 0.997 | D | 0.439 | neutral | N | 0.515975293 | None | None | I |
E/W | 0.9281 | likely_pathogenic | 0.9403 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
E/Y | 0.7408 | likely_pathogenic | 0.7739 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.556 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.