Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5773 | 17542;17543;17544 | chr2:178731449;178731448;178731447 | chr2:179596176;179596175;179596174 |
N2AB | 5456 | 16591;16592;16593 | chr2:178731449;178731448;178731447 | chr2:179596176;179596175;179596174 |
N2A | 4529 | 13810;13811;13812 | chr2:178731449;178731448;178731447 | chr2:179596176;179596175;179596174 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs760724229 | 0.12 | 0.967 | N | 0.397 | 0.14 | 0.132336055621 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2111 | likely_benign | 0.2534 | benign | -0.221 | Destabilizing | 0.134 | N | 0.294 | neutral | N | 0.498980603 | None | None | N |
D/C | 0.7184 | likely_pathogenic | 0.7514 | pathogenic | 0.157 | Stabilizing | 0.999 | D | 0.427 | neutral | None | None | None | None | N |
D/E | 0.2601 | likely_benign | 0.3072 | benign | -0.296 | Destabilizing | 0.967 | D | 0.397 | neutral | N | 0.508157447 | None | None | N |
D/F | 0.6699 | likely_pathogenic | 0.7436 | pathogenic | -0.306 | Destabilizing | 0.997 | D | 0.411 | neutral | None | None | None | None | N |
D/G | 0.1303 | likely_benign | 0.1366 | benign | -0.398 | Destabilizing | 0.035 | N | 0.331 | neutral | N | 0.465595961 | None | None | N |
D/H | 0.3894 | ambiguous | 0.4452 | ambiguous | -0.17 | Destabilizing | 0.999 | D | 0.383 | neutral | N | 0.469823578 | None | None | N |
D/I | 0.5653 | likely_pathogenic | 0.6665 | pathogenic | 0.19 | Stabilizing | 0.991 | D | 0.415 | neutral | None | None | None | None | N |
D/K | 0.4769 | ambiguous | 0.5259 | ambiguous | 0.364 | Stabilizing | 0.884 | D | 0.367 | neutral | None | None | None | None | N |
D/L | 0.4974 | ambiguous | 0.5769 | pathogenic | 0.19 | Stabilizing | 0.982 | D | 0.413 | neutral | None | None | None | None | N |
D/M | 0.6782 | likely_pathogenic | 0.7439 | pathogenic | 0.361 | Stabilizing | 0.999 | D | 0.415 | neutral | None | None | None | None | N |
D/N | 0.102 | likely_benign | 0.1137 | benign | 0.157 | Stabilizing | 0.92 | D | 0.403 | neutral | N | 0.479354692 | None | None | N |
D/P | 0.8835 | likely_pathogenic | 0.9063 | pathogenic | 0.075 | Stabilizing | 0.991 | D | 0.387 | neutral | None | None | None | None | N |
D/Q | 0.4914 | ambiguous | 0.5452 | ambiguous | 0.171 | Stabilizing | 0.991 | D | 0.372 | neutral | None | None | None | None | N |
D/R | 0.5212 | ambiguous | 0.578 | pathogenic | 0.466 | Stabilizing | 0.321 | N | 0.359 | neutral | None | None | None | None | N |
D/S | 0.1348 | likely_benign | 0.1487 | benign | 0.05 | Stabilizing | 0.373 | N | 0.229 | neutral | None | None | None | None | N |
D/T | 0.2499 | likely_benign | 0.272 | benign | 0.183 | Stabilizing | 0.884 | D | 0.393 | neutral | None | None | None | None | N |
D/V | 0.3344 | likely_benign | 0.4233 | ambiguous | 0.075 | Stabilizing | 0.976 | D | 0.415 | neutral | N | 0.481686862 | None | None | N |
D/W | 0.9059 | likely_pathogenic | 0.9255 | pathogenic | -0.228 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
D/Y | 0.2976 | likely_benign | 0.3635 | ambiguous | -0.081 | Destabilizing | 0.996 | D | 0.41 | neutral | N | 0.470330557 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.