Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5784 | 17575;17576;17577 | chr2:178731416;178731415;178731414 | chr2:179596143;179596142;179596141 |
N2AB | 5467 | 16624;16625;16626 | chr2:178731416;178731415;178731414 | chr2:179596143;179596142;179596141 |
N2A | 4540 | 13843;13844;13845 | chr2:178731416;178731415;178731414 | chr2:179596143;179596142;179596141 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs2080478470 | None | 0.934 | D | 0.517 | 0.195 | 0.502254315933 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/M | rs2080478470 | None | 0.934 | D | 0.517 | 0.195 | 0.502254315933 | gnomAD-4.0.0 | 6.57324E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47042E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1883 | likely_benign | 0.1816 | benign | -1.514 | Destabilizing | 0.051 | N | 0.119 | neutral | D | 0.534846269 | None | None | N |
V/C | 0.7514 | likely_pathogenic | 0.7362 | pathogenic | -1.216 | Destabilizing | 0.998 | D | 0.566 | neutral | None | None | None | None | N |
V/D | 0.3778 | ambiguous | 0.3616 | ambiguous | -1.407 | Destabilizing | 0.974 | D | 0.656 | neutral | None | None | None | None | N |
V/E | 0.241 | likely_benign | 0.233 | benign | -1.411 | Destabilizing | 0.801 | D | 0.615 | neutral | D | 0.533806119 | None | None | N |
V/F | 0.1553 | likely_benign | 0.1635 | benign | -1.324 | Destabilizing | 0.949 | D | 0.595 | neutral | None | None | None | None | N |
V/G | 0.3213 | likely_benign | 0.3233 | benign | -1.818 | Destabilizing | 0.801 | D | 0.641 | neutral | N | 0.49836818 | None | None | N |
V/H | 0.4873 | ambiguous | 0.4657 | ambiguous | -1.358 | Destabilizing | 0.037 | N | 0.491 | neutral | None | None | None | None | N |
V/I | 0.0672 | likely_benign | 0.068 | benign | -0.779 | Destabilizing | 0.016 | N | 0.149 | neutral | None | None | None | None | N |
V/K | 0.3017 | likely_benign | 0.2818 | benign | -1.096 | Destabilizing | 0.842 | D | 0.617 | neutral | None | None | None | None | N |
V/L | 0.19 | likely_benign | 0.1881 | benign | -0.779 | Destabilizing | 0.454 | N | 0.397 | neutral | N | 0.49388508 | None | None | N |
V/M | 0.1042 | likely_benign | 0.1055 | benign | -0.662 | Destabilizing | 0.934 | D | 0.517 | neutral | D | 0.52824837 | None | None | N |
V/N | 0.2684 | likely_benign | 0.2626 | benign | -0.941 | Destabilizing | 0.949 | D | 0.653 | neutral | None | None | None | None | N |
V/P | 0.9734 | likely_pathogenic | 0.972 | pathogenic | -0.99 | Destabilizing | 0.991 | D | 0.633 | neutral | None | None | None | None | N |
V/Q | 0.2756 | likely_benign | 0.2615 | benign | -1.149 | Destabilizing | 0.974 | D | 0.643 | neutral | None | None | None | None | N |
V/R | 0.2709 | likely_benign | 0.2535 | benign | -0.614 | Destabilizing | 0.974 | D | 0.667 | neutral | None | None | None | None | N |
V/S | 0.224 | likely_benign | 0.2177 | benign | -1.493 | Destabilizing | 0.728 | D | 0.594 | neutral | None | None | None | None | N |
V/T | 0.1331 | likely_benign | 0.1282 | benign | -1.386 | Destabilizing | 0.029 | N | 0.117 | neutral | None | None | None | None | N |
V/W | 0.7491 | likely_pathogenic | 0.7587 | pathogenic | -1.477 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/Y | 0.4877 | ambiguous | 0.4711 | ambiguous | -1.161 | Destabilizing | 0.949 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.