Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5797 | 17614;17615;17616 | chr2:178731377;178731376;178731375 | chr2:179596104;179596103;179596102 |
N2AB | 5480 | 16663;16664;16665 | chr2:178731377;178731376;178731375 | chr2:179596104;179596103;179596102 |
N2A | 4553 | 13882;13883;13884 | chr2:178731377;178731376;178731375 | chr2:179596104;179596103;179596102 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs752644615 | -0.601 | 0.801 | N | 0.439 | 0.154 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/N | rs752644615 | -0.601 | 0.801 | N | 0.439 | 0.154 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs752644615 | -0.601 | 0.801 | N | 0.439 | 0.154 | None | gnomAD-4.0.0 | 6.57263E-06 | None | None | None | None | N | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1441 | likely_benign | 0.1211 | benign | -0.631 | Destabilizing | 0.022 | N | 0.291 | neutral | N | 0.373268243 | None | None | N |
D/C | 0.6553 | likely_pathogenic | 0.5783 | pathogenic | -0.178 | Destabilizing | 0.998 | D | 0.564 | neutral | None | None | None | None | N |
D/E | 0.243 | likely_benign | 0.213 | benign | -0.537 | Destabilizing | 0.771 | D | 0.437 | neutral | N | 0.405801949 | None | None | N |
D/F | 0.6726 | likely_pathogenic | 0.6171 | pathogenic | -0.128 | Destabilizing | 0.991 | D | 0.599 | neutral | None | None | None | None | N |
D/G | 0.1549 | likely_benign | 0.1371 | benign | -0.976 | Destabilizing | 0.005 | N | 0.192 | neutral | N | 0.39510774 | None | None | N |
D/H | 0.3334 | likely_benign | 0.2986 | benign | -0.326 | Destabilizing | 0.997 | D | 0.561 | neutral | N | 0.485324312 | None | None | N |
D/I | 0.5327 | ambiguous | 0.4586 | ambiguous | 0.281 | Stabilizing | 0.949 | D | 0.609 | neutral | None | None | None | None | N |
D/K | 0.4951 | ambiguous | 0.4516 | ambiguous | -0.11 | Destabilizing | 0.915 | D | 0.571 | neutral | None | None | None | None | N |
D/L | 0.5011 | ambiguous | 0.4536 | ambiguous | 0.281 | Stabilizing | 0.842 | D | 0.566 | neutral | None | None | None | None | N |
D/M | 0.7077 | likely_pathogenic | 0.6368 | pathogenic | 0.691 | Stabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
D/N | 0.1123 | likely_benign | 0.1061 | benign | -0.688 | Destabilizing | 0.801 | D | 0.439 | neutral | N | 0.460292582 | None | None | N |
D/P | 0.8894 | likely_pathogenic | 0.8722 | pathogenic | 0.001 | Stabilizing | 0.974 | D | 0.609 | neutral | None | None | None | None | N |
D/Q | 0.3811 | ambiguous | 0.3436 | ambiguous | -0.554 | Destabilizing | 0.991 | D | 0.529 | neutral | None | None | None | None | N |
D/R | 0.4628 | ambiguous | 0.4257 | ambiguous | 0.064 | Stabilizing | 0.974 | D | 0.607 | neutral | None | None | None | None | N |
D/S | 0.1045 | likely_benign | 0.0905 | benign | -0.91 | Destabilizing | 0.525 | D | 0.441 | neutral | None | None | None | None | N |
D/T | 0.2683 | likely_benign | 0.2261 | benign | -0.615 | Destabilizing | 0.067 | N | 0.26 | neutral | None | None | None | None | N |
D/V | 0.3302 | likely_benign | 0.2821 | benign | 0.001 | Stabilizing | 0.801 | D | 0.554 | neutral | N | 0.455270764 | None | None | N |
D/W | 0.9208 | likely_pathogenic | 0.9009 | pathogenic | 0.139 | Stabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | N |
D/Y | 0.2881 | likely_benign | 0.2557 | benign | 0.152 | Stabilizing | 0.989 | D | 0.577 | neutral | N | 0.485497671 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.