Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5825 | 17698;17699;17700 | chr2:178731192;178731191;178731190 | chr2:179595919;179595918;179595917 |
N2AB | 5508 | 16747;16748;16749 | chr2:178731192;178731191;178731190 | chr2:179595919;179595918;179595917 |
N2A | 4581 | 13966;13967;13968 | chr2:178731192;178731191;178731190 | chr2:179595919;179595918;179595917 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs778914141 | -1.331 | 0.4 | N | 0.281 | 0.217 | 0.516938183928 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 8.71E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 1.66168E-04 |
I/V | rs778914141 | -1.331 | 0.4 | N | 0.281 | 0.217 | 0.516938183928 | gnomAD-4.0.0 | 1.11509E-05 | None | None | None | None | N | None | 0 | 1.14453E-04 | None | 0 | 0 | None | 0 | 0 | 5.72361E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8901 | likely_pathogenic | 0.8966 | pathogenic | -2.203 | Highly Destabilizing | 0.985 | D | 0.749 | deleterious | None | None | None | None | N |
I/C | 0.9574 | likely_pathogenic | 0.958 | pathogenic | -1.972 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
I/D | 0.9949 | likely_pathogenic | 0.9953 | pathogenic | -2.04 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
I/E | 0.9872 | likely_pathogenic | 0.9893 | pathogenic | -1.925 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
I/F | 0.5365 | ambiguous | 0.5155 | ambiguous | -1.533 | Destabilizing | 0.265 | N | 0.466 | neutral | N | 0.507715595 | None | None | N |
I/G | 0.9879 | likely_pathogenic | 0.9884 | pathogenic | -2.627 | Highly Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
I/H | 0.983 | likely_pathogenic | 0.9842 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
I/K | 0.9577 | likely_pathogenic | 0.9649 | pathogenic | -1.492 | Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
I/L | 0.3739 | ambiguous | 0.3701 | ambiguous | -1.038 | Destabilizing | 0.817 | D | 0.556 | neutral | N | 0.506220256 | None | None | N |
I/M | 0.304 | likely_benign | 0.3109 | benign | -1.183 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | D | 0.526859406 | None | None | N |
I/N | 0.938 | likely_pathogenic | 0.9438 | pathogenic | -1.595 | Destabilizing | 0.999 | D | 0.888 | deleterious | D | 0.528126854 | None | None | N |
I/P | 0.9706 | likely_pathogenic | 0.9747 | pathogenic | -1.401 | Destabilizing | 0.999 | D | 0.89 | deleterious | None | None | None | None | N |
I/Q | 0.9743 | likely_pathogenic | 0.9764 | pathogenic | -1.659 | Destabilizing | 0.999 | D | 0.905 | deleterious | None | None | None | None | N |
I/R | 0.9399 | likely_pathogenic | 0.9491 | pathogenic | -1.08 | Destabilizing | 0.999 | D | 0.89 | deleterious | None | None | None | None | N |
I/S | 0.94 | likely_pathogenic | 0.9451 | pathogenic | -2.336 | Highly Destabilizing | 0.997 | D | 0.85 | deleterious | D | 0.527873364 | None | None | N |
I/T | 0.9119 | likely_pathogenic | 0.9223 | pathogenic | -2.087 | Highly Destabilizing | 0.98 | D | 0.823 | deleterious | D | 0.527619875 | None | None | N |
I/V | 0.0948 | likely_benign | 0.0953 | benign | -1.401 | Destabilizing | 0.4 | N | 0.281 | neutral | N | 0.489330542 | None | None | N |
I/W | 0.9811 | likely_pathogenic | 0.9782 | pathogenic | -1.681 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
I/Y | 0.9341 | likely_pathogenic | 0.9333 | pathogenic | -1.407 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.