Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5827 | 17704;17705;17706 | chr2:178731186;178731185;178731184 | chr2:179595913;179595912;179595911 |
N2AB | 5510 | 16753;16754;16755 | chr2:178731186;178731185;178731184 | chr2:179595913;179595912;179595911 |
N2A | 4583 | 13972;13973;13974 | chr2:178731186;178731185;178731184 | chr2:179595913;179595912;179595911 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs753975878 | -0.03 | 0.426 | N | 0.351 | 0.197 | None | gnomAD-2.1.1 | 4.02E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.55E-05 | None | 4.66E-05 | 6.22E-05 | 0 |
E/K | rs753975878 | -0.03 | 0.426 | N | 0.351 | 0.197 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs753975878 | -0.03 | 0.426 | N | 0.351 | 0.197 | None | gnomAD-4.0.0 | 1.67386E-05 | None | None | None | None | N | None | 1.33651E-05 | 1.66828E-05 | None | 0 | 0 | None | 1.56309E-05 | 0 | 1.69576E-05 | 4.39445E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2139 | likely_benign | 0.1926 | benign | -0.516 | Destabilizing | 0.117 | N | 0.349 | neutral | N | 0.512009481 | None | None | N |
E/C | 0.8945 | likely_pathogenic | 0.8854 | pathogenic | -0.194 | Destabilizing | 0.935 | D | 0.491 | neutral | None | None | None | None | N |
E/D | 0.1089 | likely_benign | 0.1112 | benign | -0.495 | Destabilizing | None | N | 0.097 | neutral | N | 0.452366532 | None | None | N |
E/F | 0.875 | likely_pathogenic | 0.857 | pathogenic | -0.299 | Destabilizing | 0.791 | D | 0.461 | neutral | None | None | None | None | N |
E/G | 0.2145 | likely_benign | 0.2006 | benign | -0.744 | Destabilizing | 0.117 | N | 0.379 | neutral | N | 0.517378016 | None | None | N |
E/H | 0.5512 | ambiguous | 0.5033 | ambiguous | -0.134 | Destabilizing | 0.555 | D | 0.383 | neutral | None | None | None | None | N |
E/I | 0.5996 | likely_pathogenic | 0.5502 | ambiguous | 0.059 | Stabilizing | 0.38 | N | 0.467 | neutral | None | None | None | None | N |
E/K | 0.1938 | likely_benign | 0.1742 | benign | 0.088 | Stabilizing | 0.426 | N | 0.351 | neutral | N | 0.458887073 | None | None | N |
E/L | 0.5924 | likely_pathogenic | 0.5606 | ambiguous | 0.059 | Stabilizing | 0.149 | N | 0.409 | neutral | None | None | None | None | N |
E/M | 0.6424 | likely_pathogenic | 0.6041 | pathogenic | 0.172 | Stabilizing | 0.935 | D | 0.455 | neutral | None | None | None | None | N |
E/N | 0.2798 | likely_benign | 0.2601 | benign | -0.27 | Destabilizing | 0.081 | N | 0.302 | neutral | None | None | None | None | N |
E/P | 0.9328 | likely_pathogenic | 0.8984 | pathogenic | -0.112 | Destabilizing | 0.555 | D | 0.4 | neutral | None | None | None | None | N |
E/Q | 0.1913 | likely_benign | 0.1666 | benign | -0.225 | Destabilizing | 0.251 | N | 0.377 | neutral | N | 0.484724093 | None | None | N |
E/R | 0.3437 | ambiguous | 0.314 | benign | 0.35 | Stabilizing | 0.38 | N | 0.373 | neutral | None | None | None | None | N |
E/S | 0.2327 | likely_benign | 0.2076 | benign | -0.445 | Destabilizing | 0.081 | N | 0.311 | neutral | None | None | None | None | N |
E/T | 0.3104 | likely_benign | 0.2645 | benign | -0.263 | Destabilizing | 0.002 | N | 0.211 | neutral | None | None | None | None | N |
E/V | 0.3527 | ambiguous | 0.316 | benign | -0.112 | Destabilizing | 0.117 | N | 0.385 | neutral | N | 0.512529556 | None | None | N |
E/W | 0.9247 | likely_pathogenic | 0.9148 | pathogenic | -0.113 | Destabilizing | 0.935 | D | 0.565 | neutral | None | None | None | None | N |
E/Y | 0.7194 | likely_pathogenic | 0.6985 | pathogenic | -0.057 | Destabilizing | 0.791 | D | 0.454 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.