Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5833 | 17722;17723;17724 | chr2:178731168;178731167;178731166 | chr2:179595895;179595894;179595893 |
N2AB | 5516 | 16771;16772;16773 | chr2:178731168;178731167;178731166 | chr2:179595895;179595894;179595893 |
N2A | 4589 | 13990;13991;13992 | chr2:178731168;178731167;178731166 | chr2:179595895;179595894;179595893 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1340894070 | -0.295 | 0.91 | D | 0.512 | 0.269 | 0.299086750705 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/G | rs1340894070 | -0.295 | 0.91 | D | 0.512 | 0.269 | 0.299086750705 | gnomAD-3.1.2 | 8.55E-05 | None | None | None | None | N | None | 0 | 8.51677E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs1340894070 | -0.295 | 0.91 | D | 0.512 | 0.269 | 0.299086750705 | gnomAD-4.0.0 | 1.92212E-05 | None | None | None | None | N | None | 0 | 2.5428E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2889 | likely_benign | 0.2982 | benign | -0.296 | Destabilizing | 0.835 | D | 0.509 | neutral | N | 0.469045351 | None | None | N |
D/C | 0.8322 | likely_pathogenic | 0.8779 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
D/E | 0.3368 | likely_benign | 0.3248 | benign | -0.31 | Destabilizing | 0.91 | D | 0.466 | neutral | N | 0.423406275 | None | None | N |
D/F | 0.7908 | likely_pathogenic | 0.797 | pathogenic | -0.133 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
D/G | 0.387 | ambiguous | 0.4417 | ambiguous | -0.504 | Destabilizing | 0.91 | D | 0.512 | neutral | D | 0.529421806 | None | None | N |
D/H | 0.4576 | ambiguous | 0.4577 | ambiguous | 0.061 | Stabilizing | 0.994 | D | 0.559 | neutral | N | 0.492423643 | None | None | N |
D/I | 0.6067 | likely_pathogenic | 0.61 | pathogenic | 0.209 | Stabilizing | 0.996 | D | 0.631 | neutral | None | None | None | None | N |
D/K | 0.6624 | likely_pathogenic | 0.6781 | pathogenic | 0.381 | Stabilizing | 0.97 | D | 0.515 | neutral | None | None | None | None | N |
D/L | 0.6374 | likely_pathogenic | 0.6348 | pathogenic | 0.209 | Stabilizing | 0.996 | D | 0.538 | neutral | None | None | None | None | N |
D/M | 0.7836 | likely_pathogenic | 0.7941 | pathogenic | 0.305 | Stabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
D/N | 0.1494 | likely_benign | 0.1573 | benign | -0.048 | Destabilizing | 0.248 | N | 0.224 | neutral | N | 0.462100736 | None | None | N |
D/P | 0.8863 | likely_pathogenic | 0.895 | pathogenic | 0.063 | Stabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | N |
D/Q | 0.5987 | likely_pathogenic | 0.5953 | pathogenic | 0.003 | Stabilizing | 0.996 | D | 0.473 | neutral | None | None | None | None | N |
D/R | 0.6546 | likely_pathogenic | 0.6661 | pathogenic | 0.563 | Stabilizing | 0.996 | D | 0.601 | neutral | None | None | None | None | N |
D/S | 0.1887 | likely_benign | 0.2006 | benign | -0.132 | Destabilizing | 0.348 | N | 0.125 | neutral | None | None | None | None | N |
D/T | 0.3475 | ambiguous | 0.3695 | ambiguous | 0.039 | Stabilizing | 0.942 | D | 0.494 | neutral | None | None | None | None | N |
D/V | 0.3773 | ambiguous | 0.3916 | ambiguous | 0.063 | Stabilizing | 0.994 | D | 0.567 | neutral | N | 0.448976723 | None | None | N |
D/W | 0.9513 | likely_pathogenic | 0.9532 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
D/Y | 0.4037 | ambiguous | 0.4231 | ambiguous | 0.12 | Stabilizing | 0.998 | D | 0.635 | neutral | N | 0.486671107 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.