Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5852 | 17779;17780;17781 | chr2:178731111;178731110;178731109 | chr2:179595838;179595837;179595836 |
N2AB | 5535 | 16828;16829;16830 | chr2:178731111;178731110;178731109 | chr2:179595838;179595837;179595836 |
N2A | 4608 | 14047;14048;14049 | chr2:178731111;178731110;178731109 | chr2:179595838;179595837;179595836 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.998 | N | 0.616 | 0.449 | 0.886848395655 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
I/V | None | None | 0.689 | N | 0.327 | 0.149 | 0.531629458225 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7599 | likely_pathogenic | 0.7138 | pathogenic | -1.848 | Destabilizing | 0.965 | D | 0.482 | neutral | None | None | None | None | N |
I/C | 0.8918 | likely_pathogenic | 0.8669 | pathogenic | -1.349 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
I/D | 0.9573 | likely_pathogenic | 0.9466 | pathogenic | -1.001 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/E | 0.9204 | likely_pathogenic | 0.8998 | pathogenic | -0.945 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
I/F | 0.4024 | ambiguous | 0.3158 | benign | -1.226 | Destabilizing | 0.989 | D | 0.541 | neutral | N | 0.500504409 | None | None | N |
I/G | 0.9212 | likely_pathogenic | 0.9009 | pathogenic | -2.228 | Highly Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/H | 0.8873 | likely_pathogenic | 0.85 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/K | 0.7422 | likely_pathogenic | 0.668 | pathogenic | -1.175 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
I/L | 0.1293 | likely_benign | 0.1193 | benign | -0.851 | Destabilizing | 0.011 | N | 0.121 | neutral | N | 0.419712609 | None | None | N |
I/M | 0.1221 | likely_benign | 0.1118 | benign | -0.799 | Destabilizing | 0.989 | D | 0.572 | neutral | N | 0.504544791 | None | None | N |
I/N | 0.624 | likely_pathogenic | 0.5755 | pathogenic | -1.071 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | D | 0.534520982 | None | None | N |
I/P | 0.8442 | likely_pathogenic | 0.8157 | pathogenic | -1.153 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/Q | 0.8328 | likely_pathogenic | 0.7864 | pathogenic | -1.172 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/R | 0.7146 | likely_pathogenic | 0.6342 | pathogenic | -0.711 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/S | 0.8059 | likely_pathogenic | 0.759 | pathogenic | -1.823 | Destabilizing | 0.998 | D | 0.616 | neutral | N | 0.504544791 | None | None | N |
I/T | 0.7307 | likely_pathogenic | 0.6744 | pathogenic | -1.634 | Destabilizing | 0.98 | D | 0.576 | neutral | N | 0.504544791 | None | None | N |
I/V | 0.1526 | likely_benign | 0.1397 | benign | -1.153 | Destabilizing | 0.689 | D | 0.327 | neutral | N | 0.483110726 | None | None | N |
I/W | 0.9228 | likely_pathogenic | 0.8939 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
I/Y | 0.761 | likely_pathogenic | 0.695 | pathogenic | -1.054 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.