Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5853 | 17782;17783;17784 | chr2:178731108;178731107;178731106 | chr2:179595835;179595834;179595833 |
N2AB | 5536 | 16831;16832;16833 | chr2:178731108;178731107;178731106 | chr2:179595835;179595834;179595833 |
N2A | 4609 | 14050;14051;14052 | chr2:178731108;178731107;178731106 | chr2:179595835;179595834;179595833 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2154308873 | None | None | N | 0.315 | 0.155 | 0.277730125212 | gnomAD-4.0.0 | 4.1054E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39702E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0675 | likely_benign | 0.0729 | benign | -0.418 | Destabilizing | 0.005 | N | 0.245 | neutral | D | 0.524111987 | None | None | N |
T/C | 0.3098 | likely_benign | 0.3409 | ambiguous | -0.373 | Destabilizing | 0.676 | D | 0.473 | neutral | None | None | None | None | N |
T/D | 0.2714 | likely_benign | 0.3124 | benign | 0.05 | Stabilizing | 0.038 | N | 0.442 | neutral | None | None | None | None | N |
T/E | 0.2064 | likely_benign | 0.2423 | benign | 0.018 | Stabilizing | 0.038 | N | 0.45 | neutral | None | None | None | None | N |
T/F | 0.1584 | likely_benign | 0.1723 | benign | -0.702 | Destabilizing | 0.214 | N | 0.517 | neutral | None | None | None | None | N |
T/G | 0.1988 | likely_benign | 0.2054 | benign | -0.618 | Destabilizing | 0.038 | N | 0.461 | neutral | None | None | None | None | N |
T/H | 0.1546 | likely_benign | 0.1769 | benign | -0.892 | Destabilizing | 0.356 | N | 0.491 | neutral | None | None | None | None | N |
T/I | 0.1093 | likely_benign | 0.1177 | benign | 0.001 | Stabilizing | None | N | 0.315 | neutral | N | 0.519418243 | None | None | N |
T/K | 0.1138 | likely_benign | 0.1349 | benign | -0.523 | Destabilizing | None | N | 0.201 | neutral | N | 0.472797732 | None | None | N |
T/L | 0.0847 | likely_benign | 0.0875 | benign | 0.001 | Stabilizing | 0.006 | N | 0.407 | neutral | None | None | None | None | N |
T/M | 0.0814 | likely_benign | 0.0843 | benign | 0.027 | Stabilizing | 0.214 | N | 0.504 | neutral | None | None | None | None | N |
T/N | 0.1004 | likely_benign | 0.1082 | benign | -0.402 | Destabilizing | 0.038 | N | 0.301 | neutral | None | None | None | None | N |
T/P | 0.2332 | likely_benign | 0.286 | benign | -0.107 | Destabilizing | 0.055 | N | 0.574 | neutral | N | 0.512750715 | None | None | N |
T/Q | 0.1513 | likely_benign | 0.1748 | benign | -0.542 | Destabilizing | 0.038 | N | 0.574 | neutral | None | None | None | None | N |
T/R | 0.0953 | likely_benign | 0.1151 | benign | -0.292 | Destabilizing | None | N | 0.313 | neutral | N | 0.486671107 | None | None | N |
T/S | 0.0845 | likely_benign | 0.088 | benign | -0.603 | Destabilizing | None | N | 0.122 | neutral | N | 0.477510119 | None | None | N |
T/V | 0.1027 | likely_benign | 0.1075 | benign | -0.107 | Destabilizing | None | N | 0.149 | neutral | None | None | None | None | N |
T/W | 0.4216 | ambiguous | 0.4712 | ambiguous | -0.722 | Destabilizing | 0.864 | D | 0.526 | neutral | None | None | None | None | N |
T/Y | 0.1886 | likely_benign | 0.2079 | benign | -0.444 | Destabilizing | 0.356 | N | 0.5 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.