Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5854 | 17785;17786;17787 | chr2:178731105;178731104;178731103 | chr2:179595832;179595831;179595830 |
N2AB | 5537 | 16834;16835;16836 | chr2:178731105;178731104;178731103 | chr2:179595832;179595831;179595830 |
N2A | 4610 | 14053;14054;14055 | chr2:178731105;178731104;178731103 | chr2:179595832;179595831;179595830 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 1.0 | N | 0.847 | 0.47 | 0.738729810274 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 1.65673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6423 | likely_pathogenic | 0.5901 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
A/D | 0.851 | likely_pathogenic | 0.8725 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.483833132 | None | None | N |
A/E | 0.7508 | likely_pathogenic | 0.7478 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
A/F | 0.7453 | likely_pathogenic | 0.7077 | pathogenic | -0.544 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
A/G | 0.2176 | likely_benign | 0.2368 | benign | -1.011 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.483579643 | None | None | N |
A/H | 0.8595 | likely_pathogenic | 0.8443 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/I | 0.5455 | ambiguous | 0.4348 | ambiguous | 0.238 | Stabilizing | 0.994 | D | 0.742 | deleterious | None | None | None | None | N |
A/K | 0.847 | likely_pathogenic | 0.8282 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
A/L | 0.5147 | ambiguous | 0.4324 | ambiguous | 0.238 | Stabilizing | 0.994 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/M | 0.5221 | ambiguous | 0.4375 | ambiguous | 0.098 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/N | 0.7391 | likely_pathogenic | 0.7233 | pathogenic | -0.97 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/P | 0.4895 | ambiguous | 0.4234 | ambiguous | -0.014 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.527074934 | None | None | N |
A/Q | 0.7301 | likely_pathogenic | 0.7055 | pathogenic | -0.921 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
A/R | 0.7672 | likely_pathogenic | 0.752 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
A/S | 0.1391 | likely_benign | 0.1443 | benign | -1.349 | Destabilizing | 0.998 | D | 0.622 | neutral | N | 0.483326153 | None | None | N |
A/T | 0.1377 | likely_benign | 0.1239 | benign | -1.128 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | N | 0.494135797 | None | None | N |
A/V | 0.2346 | likely_benign | 0.1815 | benign | -0.014 | Destabilizing | 0.884 | D | 0.424 | neutral | N | 0.416447725 | None | None | N |
A/W | 0.9373 | likely_pathogenic | 0.9268 | pathogenic | -1.118 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/Y | 0.8302 | likely_pathogenic | 0.804 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.