Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5860 | 17803;17804;17805 | chr2:178731087;178731086;178731085 | chr2:179595814;179595813;179595812 |
N2AB | 5543 | 16852;16853;16854 | chr2:178731087;178731086;178731085 | chr2:179595814;179595813;179595812 |
N2A | 4616 | 14071;14072;14073 | chr2:178731087;178731086;178731085 | chr2:179595814;179595813;179595812 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs754157651 | -0.507 | 0.898 | N | 0.557 | 0.392 | 0.242825505644 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 1.77E-05 | 0 |
G/D | rs754157651 | -0.507 | 0.898 | N | 0.557 | 0.392 | 0.242825505644 | gnomAD-4.0.0 | 4.78975E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51978E-05 | None | 0 | 0 | 5.3971E-06 | 0 | 0 |
G/V | None | None | 1.0 | D | 0.721 | 0.513 | 0.789514686668 | gnomAD-4.0.0 | 6.8425E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99517E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2914 | likely_benign | 0.3407 | ambiguous | -0.304 | Destabilizing | 1.0 | D | 0.561 | neutral | N | 0.5041438 | None | None | N |
G/C | 0.3633 | ambiguous | 0.4565 | ambiguous | -0.898 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.523262013 | None | None | N |
G/D | 0.1813 | likely_benign | 0.2079 | benign | -0.568 | Destabilizing | 0.898 | D | 0.557 | neutral | N | 0.472464286 | None | None | N |
G/E | 0.2433 | likely_benign | 0.296 | benign | -0.721 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
G/F | 0.7527 | likely_pathogenic | 0.8239 | pathogenic | -0.991 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
G/H | 0.3819 | ambiguous | 0.4373 | ambiguous | -0.462 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
G/I | 0.6245 | likely_pathogenic | 0.7132 | pathogenic | -0.449 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
G/K | 0.3571 | ambiguous | 0.4244 | ambiguous | -0.817 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/L | 0.6744 | likely_pathogenic | 0.74 | pathogenic | -0.449 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/M | 0.6732 | likely_pathogenic | 0.7367 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
G/N | 0.2292 | likely_benign | 0.248 | benign | -0.478 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
G/P | 0.9742 | likely_pathogenic | 0.9825 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
G/Q | 0.2833 | likely_benign | 0.3247 | benign | -0.744 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/R | 0.2438 | likely_benign | 0.3033 | benign | -0.365 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.521994565 | None | None | N |
G/S | 0.1187 | likely_benign | 0.1316 | benign | -0.621 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.484518608 | None | None | N |
G/T | 0.3538 | ambiguous | 0.4098 | ambiguous | -0.703 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
G/V | 0.5331 | ambiguous | 0.6304 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | D | 0.523262013 | None | None | N |
G/W | 0.6289 | likely_pathogenic | 0.7106 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
G/Y | 0.5739 | likely_pathogenic | 0.6823 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.