Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5866 | 17821;17822;17823 | chr2:178731069;178731068;178731067 | chr2:179595796;179595795;179595794 |
N2AB | 5549 | 16870;16871;16872 | chr2:178731069;178731068;178731067 | chr2:179595796;179595795;179595794 |
N2A | 4622 | 14089;14090;14091 | chr2:178731069;178731068;178731067 | chr2:179595796;179595795;179595794 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | rs753136638 | -0.619 | 0.999 | N | 0.758 | 0.42 | 0.548443230319 | gnomAD-2.1.1 | 8.03E-05 | None | None | None | None | N | None | 0 | 4.63768E-04 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 3.30688E-04 |
G/C | rs753136638 | -0.619 | 0.999 | N | 0.758 | 0.42 | 0.548443230319 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.31148E-04 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/C | rs753136638 | -0.619 | 0.999 | N | 0.758 | 0.42 | 0.548443230319 | gnomAD-4.0.0 | 1.73544E-05 | None | None | None | None | N | None | 4.00919E-05 | 3.0019E-04 | None | 0 | 0 | None | 0 | 0 | 5.93371E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1495 | likely_benign | 0.1892 | benign | -0.139 | Destabilizing | 0.865 | D | 0.483 | neutral | N | 0.510717749 | None | None | N |
G/C | 0.2152 | likely_benign | 0.3277 | benign | -0.879 | Destabilizing | 0.999 | D | 0.758 | deleterious | N | 0.473243846 | None | None | N |
G/D | 0.15 | likely_benign | 0.2251 | benign | 0.047 | Stabilizing | 0.978 | D | 0.702 | prob.neutral | N | 0.469772417 | None | None | N |
G/E | 0.2653 | likely_benign | 0.4193 | ambiguous | -0.073 | Destabilizing | 0.983 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/F | 0.6044 | likely_pathogenic | 0.7558 | pathogenic | -0.671 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
G/H | 0.3851 | ambiguous | 0.5263 | ambiguous | -0.302 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | N |
G/I | 0.3972 | ambiguous | 0.6098 | pathogenic | -0.175 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
G/K | 0.5609 | ambiguous | 0.7352 | pathogenic | -0.607 | Destabilizing | 0.968 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/L | 0.4319 | ambiguous | 0.5921 | pathogenic | -0.175 | Destabilizing | 0.983 | D | 0.735 | prob.delet. | None | None | None | None | N |
G/M | 0.5649 | likely_pathogenic | 0.7072 | pathogenic | -0.499 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
G/N | 0.2177 | likely_benign | 0.2847 | benign | -0.367 | Destabilizing | 0.968 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/P | 0.8325 | likely_pathogenic | 0.9275 | pathogenic | -0.13 | Destabilizing | 0.992 | D | 0.758 | deleterious | None | None | None | None | N |
G/Q | 0.4041 | ambiguous | 0.5497 | ambiguous | -0.512 | Destabilizing | 0.983 | D | 0.766 | deleterious | None | None | None | None | N |
G/R | 0.434 | ambiguous | 0.6295 | pathogenic | -0.327 | Destabilizing | 0.978 | D | 0.755 | deleterious | N | 0.463836097 | None | None | N |
G/S | 0.0839 | likely_benign | 0.0917 | benign | -0.612 | Destabilizing | 0.146 | N | 0.409 | neutral | N | 0.431136671 | None | None | N |
G/T | 0.1533 | likely_benign | 0.1923 | benign | -0.636 | Destabilizing | 0.968 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/V | 0.2656 | likely_benign | 0.4315 | ambiguous | -0.13 | Destabilizing | 0.978 | D | 0.745 | deleterious | N | 0.491094611 | None | None | N |
G/W | 0.5228 | ambiguous | 0.6616 | pathogenic | -0.873 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
G/Y | 0.4525 | ambiguous | 0.6406 | pathogenic | -0.499 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.