Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5870 | 17833;17834;17835 | chr2:178731057;178731056;178731055 | chr2:179595784;179595783;179595782 |
N2AB | 5553 | 16882;16883;16884 | chr2:178731057;178731056;178731055 | chr2:179595784;179595783;179595782 |
N2A | 4626 | 14101;14102;14103 | chr2:178731057;178731056;178731055 | chr2:179595784;179595783;179595782 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.999 | N | 0.569 | 0.444 | 0.455816718377 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.594 | likely_pathogenic | 0.768 | pathogenic | -0.615 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
K/C | 0.8061 | likely_pathogenic | 0.9026 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/D | 0.7936 | likely_pathogenic | 0.9134 | pathogenic | 0.5 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/E | 0.3354 | likely_benign | 0.5723 | pathogenic | 0.622 | Stabilizing | 0.999 | D | 0.569 | neutral | N | 0.521765115 | None | None | N |
K/F | 0.8923 | likely_pathogenic | 0.9492 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/G | 0.7297 | likely_pathogenic | 0.8629 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
K/H | 0.3793 | ambiguous | 0.496 | ambiguous | -1.126 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/I | 0.5022 | ambiguous | 0.6994 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.756 | deleterious | N | 0.500446584 | None | None | N |
K/L | 0.5657 | likely_pathogenic | 0.7012 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
K/M | 0.3614 | ambiguous | 0.514 | ambiguous | 0.031 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
K/N | 0.6372 | likely_pathogenic | 0.8129 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.517455373 | None | None | N |
K/P | 0.961 | likely_pathogenic | 0.9798 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/Q | 0.1771 | likely_benign | 0.2731 | benign | -0.267 | Destabilizing | 1.0 | D | 0.645 | neutral | N | 0.511702837 | None | None | N |
K/R | 0.0912 | likely_benign | 0.1107 | benign | -0.3 | Destabilizing | 0.999 | D | 0.538 | neutral | N | 0.486036388 | None | None | N |
K/S | 0.6176 | likely_pathogenic | 0.801 | pathogenic | -1.037 | Destabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | N |
K/T | 0.2942 | likely_benign | 0.4747 | ambiguous | -0.698 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.52630693 | None | None | N |
K/V | 0.4924 | ambiguous | 0.6585 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/W | 0.8498 | likely_pathogenic | 0.9137 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/Y | 0.7573 | likely_pathogenic | 0.8583 | pathogenic | 0.133 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.