Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5877 | 17854;17855;17856 | chr2:178731036;178731035;178731034 | chr2:179595763;179595762;179595761 |
N2AB | 5560 | 16903;16904;16905 | chr2:178731036;178731035;178731034 | chr2:179595763;179595762;179595761 |
N2A | 4633 | 14122;14123;14124 | chr2:178731036;178731035;178731034 | chr2:179595763;179595762;179595761 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.454 | N | 0.378 | 0.138 | 0.59634542923 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1857 | likely_benign | 0.1864 | benign | -1.71 | Destabilizing | 0.454 | N | 0.378 | neutral | N | 0.521378326 | None | None | N |
V/C | 0.7686 | likely_pathogenic | 0.7722 | pathogenic | -1.255 | Destabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
V/D | 0.3827 | ambiguous | 0.403 | ambiguous | -1.839 | Destabilizing | 0.801 | D | 0.626 | neutral | N | 0.48080114 | None | None | N |
V/E | 0.283 | likely_benign | 0.2948 | benign | -1.743 | Destabilizing | 0.842 | D | 0.596 | neutral | None | None | None | None | N |
V/F | 0.1826 | likely_benign | 0.1764 | benign | -1.151 | Destabilizing | 0.934 | D | 0.557 | neutral | D | 0.522765193 | None | None | N |
V/G | 0.2898 | likely_benign | 0.309 | benign | -2.11 | Highly Destabilizing | 0.801 | D | 0.625 | neutral | N | 0.460119224 | None | None | N |
V/H | 0.5723 | likely_pathogenic | 0.5695 | pathogenic | -1.75 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
V/I | 0.08 | likely_benign | 0.0775 | benign | -0.663 | Destabilizing | 0.012 | N | 0.161 | neutral | N | 0.50227249 | None | None | N |
V/K | 0.4285 | ambiguous | 0.4351 | ambiguous | -1.353 | Destabilizing | 0.842 | D | 0.595 | neutral | None | None | None | None | N |
V/L | 0.2098 | likely_benign | 0.2042 | benign | -0.663 | Destabilizing | 0.454 | N | 0.433 | neutral | N | 0.477184832 | None | None | N |
V/M | 0.1227 | likely_benign | 0.1237 | benign | -0.649 | Destabilizing | 0.949 | D | 0.472 | neutral | None | None | None | None | N |
V/N | 0.283 | likely_benign | 0.2894 | benign | -1.37 | Destabilizing | 0.949 | D | 0.615 | neutral | None | None | None | None | N |
V/P | 0.944 | likely_pathogenic | 0.9488 | pathogenic | -0.98 | Destabilizing | 0.974 | D | 0.594 | neutral | None | None | None | None | N |
V/Q | 0.3382 | likely_benign | 0.3449 | ambiguous | -1.409 | Destabilizing | 0.974 | D | 0.607 | neutral | None | None | None | None | N |
V/R | 0.3857 | ambiguous | 0.3941 | ambiguous | -1.01 | Destabilizing | 0.974 | D | 0.629 | neutral | None | None | None | None | N |
V/S | 0.1905 | likely_benign | 0.1987 | benign | -1.952 | Destabilizing | 0.08 | N | 0.306 | neutral | None | None | None | None | N |
V/T | 0.1551 | likely_benign | 0.1523 | benign | -1.741 | Destabilizing | 0.525 | D | 0.429 | neutral | None | None | None | None | N |
V/W | 0.8329 | likely_pathogenic | 0.8401 | pathogenic | -1.498 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
V/Y | 0.5172 | ambiguous | 0.5039 | ambiguous | -1.145 | Destabilizing | 0.991 | D | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.