Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5879 | 17860;17861;17862 | chr2:178731030;178731029;178731028 | chr2:179595757;179595756;179595755 |
N2AB | 5562 | 16909;16910;16911 | chr2:178731030;178731029;178731028 | chr2:179595757;179595756;179595755 |
N2A | 4635 | 14128;14129;14130 | chr2:178731030;178731029;178731028 | chr2:179595757;179595756;179595755 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs1560793812 | None | 0.317 | N | 0.647 | 0.249 | 0.752220761769 | gnomAD-4.0.0 | 6.84257E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2407 | likely_benign | 0.5147 | ambiguous | -2.121 | Highly Destabilizing | 0.035 | N | 0.491 | neutral | None | None | None | None | N |
I/C | 0.5681 | likely_pathogenic | 0.7813 | pathogenic | -1.381 | Destabilizing | 0.824 | D | 0.597 | neutral | None | None | None | None | N |
I/D | 0.6456 | likely_pathogenic | 0.8621 | pathogenic | -1.715 | Destabilizing | 0.38 | N | 0.663 | neutral | None | None | None | None | N |
I/E | 0.5668 | likely_pathogenic | 0.7623 | pathogenic | -1.628 | Destabilizing | 0.149 | N | 0.649 | neutral | None | None | None | None | N |
I/F | 0.1392 | likely_benign | 0.2313 | benign | -1.356 | Destabilizing | 0.38 | N | 0.543 | neutral | None | None | None | None | N |
I/G | 0.5339 | ambiguous | 0.822 | pathogenic | -2.539 | Highly Destabilizing | 0.149 | N | 0.607 | neutral | None | None | None | None | N |
I/H | 0.4302 | ambiguous | 0.6276 | pathogenic | -1.745 | Destabilizing | 0.935 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/K | 0.4529 | ambiguous | 0.6502 | pathogenic | -1.429 | Destabilizing | 0.317 | N | 0.647 | neutral | N | 0.489900626 | None | None | N |
I/L | 0.1049 | likely_benign | 0.1601 | benign | -0.989 | Destabilizing | 0.012 | N | 0.445 | neutral | N | 0.497040029 | None | None | N |
I/M | 0.0896 | likely_benign | 0.137 | benign | -0.828 | Destabilizing | 0.317 | N | 0.56 | neutral | D | 0.534731625 | None | None | N |
I/N | 0.2275 | likely_benign | 0.4556 | ambiguous | -1.382 | Destabilizing | 0.38 | N | 0.663 | neutral | None | None | None | None | N |
I/P | 0.927 | likely_pathogenic | 0.9766 | pathogenic | -1.339 | Destabilizing | 0.555 | D | 0.67 | neutral | None | None | None | None | N |
I/Q | 0.4244 | ambiguous | 0.6323 | pathogenic | -1.473 | Destabilizing | 0.555 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/R | 0.3421 | ambiguous | 0.5503 | ambiguous | -0.918 | Destabilizing | 0.484 | N | 0.678 | prob.neutral | N | 0.494018366 | None | None | N |
I/S | 0.2017 | likely_benign | 0.4113 | ambiguous | -2.106 | Highly Destabilizing | 0.007 | N | 0.512 | neutral | None | None | None | None | N |
I/T | 0.1658 | likely_benign | 0.3646 | ambiguous | -1.895 | Destabilizing | 0.062 | N | 0.541 | neutral | N | 0.447107067 | None | None | N |
I/V | 0.0642 | likely_benign | 0.0865 | benign | -1.339 | Destabilizing | None | N | 0.195 | neutral | N | 0.459599149 | None | None | N |
I/W | 0.7391 | likely_pathogenic | 0.8118 | pathogenic | -1.518 | Destabilizing | 0.935 | D | 0.762 | deleterious | None | None | None | None | N |
I/Y | 0.4341 | ambiguous | 0.5487 | ambiguous | -1.282 | Destabilizing | 0.555 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.