Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5882 | 17869;17870;17871 | chr2:178731021;178731020;178731019 | chr2:179595748;179595747;179595746 |
N2AB | 5565 | 16918;16919;16920 | chr2:178731021;178731020;178731019 | chr2:179595748;179595747;179595746 |
N2A | 4638 | 14137;14138;14139 | chr2:178731021;178731020;178731019 | chr2:179595748;179595747;179595746 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs763665430 | -3.363 | 0.939 | D | 0.753 | 0.793 | 0.831353130882 | gnomAD-2.1.1 | 6.42E-05 | None | None | None | None | N | None | 0 | 5.0954E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs763665430 | -3.363 | 0.939 | D | 0.753 | 0.793 | 0.831353130882 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.31079E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs763665430 | -3.363 | 0.939 | D | 0.753 | 0.793 | 0.831353130882 | gnomAD-4.0.0 | 2.69097E-05 | None | None | None | None | N | None | 0 | 3.55993E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9204 | likely_pathogenic | 0.9568 | pathogenic | -2.921 | Highly Destabilizing | 0.91 | D | 0.698 | prob.neutral | None | None | None | None | N |
I/C | 0.9174 | likely_pathogenic | 0.9486 | pathogenic | -2.274 | Highly Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
I/D | 0.9887 | likely_pathogenic | 0.995 | pathogenic | -3.421 | Highly Destabilizing | 0.998 | D | 0.876 | deleterious | None | None | None | None | N |
I/E | 0.9793 | likely_pathogenic | 0.9902 | pathogenic | -3.149 | Highly Destabilizing | 0.993 | D | 0.876 | deleterious | None | None | None | None | N |
I/F | 0.3666 | ambiguous | 0.4863 | ambiguous | -1.727 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | D | 0.55832697 | None | None | N |
I/G | 0.9762 | likely_pathogenic | 0.9884 | pathogenic | -3.509 | Highly Destabilizing | 0.993 | D | 0.871 | deleterious | None | None | None | None | N |
I/H | 0.9594 | likely_pathogenic | 0.9785 | pathogenic | -2.991 | Highly Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
I/K | 0.956 | likely_pathogenic | 0.9762 | pathogenic | -2.318 | Highly Destabilizing | 0.993 | D | 0.875 | deleterious | None | None | None | None | N |
I/L | 0.2015 | likely_benign | 0.2262 | benign | -1.185 | Destabilizing | 0.58 | D | 0.377 | neutral | D | 0.580311591 | None | None | N |
I/M | 0.1788 | likely_benign | 0.2079 | benign | -1.256 | Destabilizing | 0.991 | D | 0.692 | prob.neutral | D | 0.59530187 | None | None | N |
I/N | 0.8695 | likely_pathogenic | 0.9256 | pathogenic | -2.817 | Highly Destabilizing | 0.997 | D | 0.887 | deleterious | D | 0.622252612 | None | None | N |
I/P | 0.9927 | likely_pathogenic | 0.9958 | pathogenic | -1.749 | Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
I/Q | 0.9634 | likely_pathogenic | 0.9804 | pathogenic | -2.595 | Highly Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
I/R | 0.9432 | likely_pathogenic | 0.9711 | pathogenic | -2.079 | Highly Destabilizing | 0.993 | D | 0.896 | deleterious | None | None | None | None | N |
I/S | 0.9277 | likely_pathogenic | 0.9646 | pathogenic | -3.499 | Highly Destabilizing | 0.991 | D | 0.841 | deleterious | D | 0.622252612 | None | None | N |
I/T | 0.9278 | likely_pathogenic | 0.9669 | pathogenic | -3.074 | Highly Destabilizing | 0.939 | D | 0.753 | deleterious | D | 0.584470494 | None | None | N |
I/V | 0.129 | likely_benign | 0.1537 | benign | -1.749 | Destabilizing | 0.02 | N | 0.246 | neutral | D | 0.55152455 | None | None | N |
I/W | 0.9529 | likely_pathogenic | 0.9708 | pathogenic | -2.159 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
I/Y | 0.834 | likely_pathogenic | 0.8924 | pathogenic | -1.928 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.