Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5883 | 17872;17873;17874 | chr2:178731018;178731017;178731016 | chr2:179595745;179595744;179595743 |
N2AB | 5566 | 16921;16922;16923 | chr2:178731018;178731017;178731016 | chr2:179595745;179595744;179595743 |
N2A | 4639 | 14140;14141;14142 | chr2:178731018;178731017;178731016 | chr2:179595745;179595744;179595743 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1468000752 | -0.926 | None | N | 0.061 | 0.092 | 0.335910606209 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22618E-04 | None | 0 | None | 0 | 0 | 0 |
I/L | rs1468000752 | -0.926 | None | N | 0.061 | 0.092 | 0.335910606209 | gnomAD-4.0.0 | 6.36659E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.10926E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2037 | likely_benign | 0.3085 | benign | -1.425 | Destabilizing | 0.055 | N | 0.378 | neutral | None | None | None | None | N |
I/C | 0.5257 | ambiguous | 0.6534 | pathogenic | -0.913 | Destabilizing | 0.859 | D | 0.392 | neutral | None | None | None | None | N |
I/D | 0.4189 | ambiguous | 0.6574 | pathogenic | -0.702 | Destabilizing | 0.124 | N | 0.477 | neutral | None | None | None | None | N |
I/E | 0.3946 | ambiguous | 0.6066 | pathogenic | -0.726 | Destabilizing | 0.22 | N | 0.487 | neutral | None | None | None | None | N |
I/F | 0.1097 | likely_benign | 0.1414 | benign | -1.016 | Destabilizing | 0.001 | N | 0.196 | neutral | N | 0.47987842 | None | None | N |
I/G | 0.3989 | ambiguous | 0.563 | ambiguous | -1.713 | Destabilizing | 0.22 | N | 0.481 | neutral | None | None | None | None | N |
I/H | 0.3054 | likely_benign | 0.4544 | ambiguous | -0.877 | Destabilizing | 0.667 | D | 0.467 | neutral | None | None | None | None | N |
I/K | 0.2592 | likely_benign | 0.4453 | ambiguous | -0.884 | Destabilizing | 0.22 | N | 0.466 | neutral | None | None | None | None | N |
I/L | 0.0743 | likely_benign | 0.0853 | benign | -0.726 | Destabilizing | None | N | 0.061 | neutral | N | 0.421099475 | None | None | N |
I/M | 0.0876 | likely_benign | 0.1033 | benign | -0.57 | Destabilizing | 0.019 | N | 0.219 | neutral | N | 0.447555358 | None | None | N |
I/N | 0.1362 | likely_benign | 0.2378 | benign | -0.67 | Destabilizing | 0.003 | N | 0.379 | neutral | N | 0.423080988 | None | None | N |
I/P | 0.3386 | likely_benign | 0.4799 | ambiguous | -0.926 | Destabilizing | 0.859 | D | 0.493 | neutral | None | None | None | None | N |
I/Q | 0.2775 | likely_benign | 0.4248 | ambiguous | -0.882 | Destabilizing | 0.667 | D | 0.495 | neutral | None | None | None | None | N |
I/R | 0.192 | likely_benign | 0.3415 | ambiguous | -0.286 | Destabilizing | 0.667 | D | 0.499 | neutral | None | None | None | None | N |
I/S | 0.1722 | likely_benign | 0.2755 | benign | -1.297 | Destabilizing | 0.096 | N | 0.431 | neutral | N | 0.424214351 | None | None | N |
I/T | 0.1473 | likely_benign | 0.2369 | benign | -1.207 | Destabilizing | 0.003 | N | 0.182 | neutral | N | 0.43449006 | None | None | N |
I/V | 0.0723 | likely_benign | 0.0796 | benign | -0.926 | Destabilizing | None | N | 0.121 | neutral | N | 0.475664679 | None | None | N |
I/W | 0.6209 | likely_pathogenic | 0.712 | pathogenic | -1.029 | Destabilizing | 0.958 | D | 0.465 | neutral | None | None | None | None | N |
I/Y | 0.335 | likely_benign | 0.4362 | ambiguous | -0.811 | Destabilizing | 0.124 | N | 0.441 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.