Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5890 | 17893;17894;17895 | chr2:178730997;178730996;178730995 | chr2:179595724;179595723;179595722 |
N2AB | 5573 | 16942;16943;16944 | chr2:178730997;178730996;178730995 | chr2:179595724;179595723;179595722 |
N2A | 4646 | 14161;14162;14163 | chr2:178730997;178730996;178730995 | chr2:179595724;179595723;179595722 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs775293848 | -0.426 | 0.961 | N | 0.473 | 0.235 | 0.262662153117 | gnomAD-2.1.1 | 3.62E-05 | None | None | None | None | N | None | 0 | 2.61081E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/T | rs775293848 | -0.426 | 0.961 | N | 0.473 | 0.235 | 0.262662153117 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs775293848 | -0.426 | 0.961 | N | 0.473 | 0.235 | 0.262662153117 | gnomAD-4.0.0 | 1.28158E-05 | None | None | None | None | N | None | 0 | 1.69509E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0714 | likely_benign | 0.0822 | benign | -0.759 | Destabilizing | 0.304 | N | 0.145 | neutral | None | None | None | None | N |
S/C | 0.1243 | likely_benign | 0.1622 | benign | -0.511 | Destabilizing | 1.0 | D | 0.569 | neutral | N | 0.500473038 | None | None | N |
S/D | 0.4925 | ambiguous | 0.5857 | pathogenic | -0.314 | Destabilizing | 0.985 | D | 0.437 | neutral | None | None | None | None | N |
S/E | 0.5705 | likely_pathogenic | 0.6396 | pathogenic | -0.315 | Destabilizing | 0.97 | D | 0.448 | neutral | None | None | None | None | N |
S/F | 0.3319 | likely_benign | 0.4409 | ambiguous | -0.945 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | N |
S/G | 0.0873 | likely_benign | 0.0991 | benign | -1.01 | Destabilizing | 0.071 | N | 0.141 | neutral | N | 0.485345742 | None | None | N |
S/H | 0.5107 | ambiguous | 0.5585 | ambiguous | -1.468 | Destabilizing | 1.0 | D | 0.565 | neutral | None | None | None | None | N |
S/I | 0.2302 | likely_benign | 0.2948 | benign | -0.197 | Destabilizing | 0.994 | D | 0.633 | neutral | N | 0.493218109 | None | None | N |
S/K | 0.6971 | likely_pathogenic | 0.7667 | pathogenic | -0.712 | Destabilizing | 0.942 | D | 0.445 | neutral | None | None | None | None | N |
S/L | 0.1367 | likely_benign | 0.1792 | benign | -0.197 | Destabilizing | 0.97 | D | 0.557 | neutral | None | None | None | None | N |
S/M | 0.2315 | likely_benign | 0.2641 | benign | 0.128 | Stabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | N |
S/N | 0.1854 | likely_benign | 0.222 | benign | -0.692 | Destabilizing | 0.98 | D | 0.467 | neutral | N | 0.485620785 | None | None | N |
S/P | 0.8531 | likely_pathogenic | 0.9083 | pathogenic | -0.35 | Destabilizing | 0.996 | D | 0.575 | neutral | None | None | None | None | N |
S/Q | 0.5768 | likely_pathogenic | 0.6057 | pathogenic | -0.854 | Destabilizing | 0.991 | D | 0.478 | neutral | None | None | None | None | N |
S/R | 0.5498 | ambiguous | 0.6156 | pathogenic | -0.586 | Destabilizing | 0.151 | N | 0.268 | neutral | N | 0.50372504 | None | None | N |
S/T | 0.0926 | likely_benign | 0.1046 | benign | -0.716 | Destabilizing | 0.961 | D | 0.473 | neutral | N | 0.499371045 | None | None | N |
S/V | 0.2584 | likely_benign | 0.3196 | benign | -0.35 | Destabilizing | 0.97 | D | 0.572 | neutral | None | None | None | None | N |
S/W | 0.5505 | ambiguous | 0.6049 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/Y | 0.3239 | likely_benign | 0.4226 | ambiguous | -0.65 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.