Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5909 | 17950;17951;17952 | chr2:178730940;178730939;178730938 | chr2:179595667;179595666;179595665 |
N2AB | 5592 | 16999;17000;17001 | chr2:178730940;178730939;178730938 | chr2:179595667;179595666;179595665 |
N2A | 4665 | 14218;14219;14220 | chr2:178730940;178730939;178730938 | chr2:179595667;179595666;179595665 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs2080369871 | None | 0.003 | N | 0.345 | 0.129 | 0.598143334274 | gnomAD-4.0.0 | 1.61471E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.90097E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.0946 | likely_benign | 0.1033 | benign | -0.813 | Destabilizing | None | N | 0.181 | neutral | None | None | None | None | N |
R/C | 0.0908 | likely_benign | 0.1026 | benign | -0.775 | Destabilizing | 0.132 | N | 0.481 | neutral | None | None | None | None | N |
R/D | 0.2019 | likely_benign | 0.242 | benign | -0.131 | Destabilizing | 0.002 | N | 0.298 | neutral | None | None | None | None | N |
R/E | 0.1616 | likely_benign | 0.1757 | benign | -0.059 | Destabilizing | 0.002 | N | 0.206 | neutral | None | None | None | None | N |
R/F | 0.2115 | likely_benign | 0.2325 | benign | -0.986 | Destabilizing | 0.041 | N | 0.541 | neutral | None | None | None | None | N |
R/G | 0.083 | likely_benign | 0.0957 | benign | -1.046 | Destabilizing | None | N | 0.202 | neutral | N | 0.482832401 | None | None | N |
R/H | 0.0651 | likely_benign | 0.068 | benign | -1.28 | Destabilizing | 0.132 | N | 0.453 | neutral | None | None | None | None | N |
R/I | 0.104 | likely_benign | 0.1127 | benign | -0.212 | Destabilizing | 0.003 | N | 0.345 | neutral | N | 0.484785595 | None | None | N |
R/K | 0.0758 | likely_benign | 0.0775 | benign | -0.776 | Destabilizing | 0.001 | N | 0.206 | neutral | N | 0.470488146 | None | None | N |
R/L | 0.113 | likely_benign | 0.1171 | benign | -0.212 | Destabilizing | 0.001 | N | 0.31 | neutral | None | None | None | None | N |
R/M | 0.1107 | likely_benign | 0.1093 | benign | -0.327 | Destabilizing | 0.132 | N | 0.513 | neutral | None | None | None | None | N |
R/N | 0.1237 | likely_benign | 0.1483 | benign | -0.176 | Destabilizing | None | N | 0.105 | neutral | None | None | None | None | N |
R/P | 0.5284 | ambiguous | 0.6106 | pathogenic | -0.393 | Destabilizing | 0.009 | N | 0.404 | neutral | None | None | None | None | N |
R/Q | 0.0732 | likely_benign | 0.0716 | benign | -0.498 | Destabilizing | 0.009 | N | 0.383 | neutral | None | None | None | None | N |
R/S | 0.0823 | likely_benign | 0.0959 | benign | -0.955 | Destabilizing | None | N | 0.167 | neutral | N | 0.427236014 | None | None | N |
R/T | 0.0598 | likely_benign | 0.0626 | benign | -0.734 | Destabilizing | None | N | 0.158 | neutral | N | 0.396779821 | None | None | N |
R/V | 0.1307 | likely_benign | 0.139 | benign | -0.393 | Destabilizing | None | N | 0.302 | neutral | None | None | None | None | N |
R/W | 0.1202 | likely_benign | 0.1192 | benign | -0.709 | Destabilizing | 0.316 | N | 0.475 | neutral | None | None | None | None | N |
R/Y | 0.1498 | likely_benign | 0.1609 | benign | -0.371 | Destabilizing | 0.041 | N | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.