Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5929 | 18010;18011;18012 | chr2:178730748;178730747;178730746 | chr2:179595475;179595474;179595473 |
N2AB | 5612 | 17059;17060;17061 | chr2:178730748;178730747;178730746 | chr2:179595475;179595474;179595473 |
N2A | 4685 | 14278;14279;14280 | chr2:178730748;178730747;178730746 | chr2:179595475;179595474;179595473 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.989 | N | 0.464 | 0.28 | 0.32306181527 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.37 | ambiguous | 0.3756 | ambiguous | -0.358 | Destabilizing | 0.978 | D | 0.513 | neutral | N | 0.489785983 | None | None | N |
D/C | 0.9037 | likely_pathogenic | 0.9059 | pathogenic | -0.011 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/E | 0.2576 | likely_benign | 0.2851 | benign | -0.442 | Destabilizing | 0.198 | N | 0.162 | neutral | N | 0.441992036 | None | None | N |
D/F | 0.8249 | likely_pathogenic | 0.8351 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
D/G | 0.3865 | ambiguous | 0.4012 | ambiguous | -0.594 | Destabilizing | 0.989 | D | 0.509 | neutral | D | 0.532654112 | None | None | N |
D/H | 0.5458 | ambiguous | 0.5623 | ambiguous | -0.284 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.500504409 | None | None | N |
D/I | 0.5942 | likely_pathogenic | 0.6305 | pathogenic | 0.223 | Stabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
D/K | 0.7431 | likely_pathogenic | 0.775 | pathogenic | 0.113 | Stabilizing | 0.983 | D | 0.514 | neutral | None | None | None | None | N |
D/L | 0.6798 | likely_pathogenic | 0.713 | pathogenic | 0.223 | Stabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
D/M | 0.8492 | likely_pathogenic | 0.8653 | pathogenic | 0.45 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
D/N | 0.1782 | likely_benign | 0.2038 | benign | -0.189 | Destabilizing | 0.989 | D | 0.464 | neutral | N | 0.451595741 | None | None | N |
D/P | 0.8886 | likely_pathogenic | 0.9085 | pathogenic | 0.053 | Stabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
D/Q | 0.6142 | likely_pathogenic | 0.6387 | pathogenic | -0.149 | Destabilizing | 0.995 | D | 0.549 | neutral | None | None | None | None | N |
D/R | 0.768 | likely_pathogenic | 0.7822 | pathogenic | 0.266 | Stabilizing | 0.995 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/S | 0.2649 | likely_benign | 0.2804 | benign | -0.325 | Destabilizing | 0.983 | D | 0.383 | neutral | None | None | None | None | N |
D/T | 0.3937 | ambiguous | 0.4287 | ambiguous | -0.145 | Destabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
D/V | 0.3556 | ambiguous | 0.3805 | ambiguous | 0.053 | Stabilizing | 0.997 | D | 0.718 | prob.delet. | N | 0.483454656 | None | None | N |
D/W | 0.9627 | likely_pathogenic | 0.9656 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
D/Y | 0.4516 | ambiguous | 0.4765 | ambiguous | -0.026 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.482092006 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.