Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5930 | 18013;18014;18015 | chr2:178730745;178730744;178730743 | chr2:179595472;179595471;179595470 |
N2AB | 5613 | 17062;17063;17064 | chr2:178730745;178730744;178730743 | chr2:179595472;179595471;179595470 |
N2A | 4686 | 14281;14282;14283 | chr2:178730745;178730744;178730743 | chr2:179595472;179595471;179595470 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.994 | D | 0.405 | 0.402 | 0.439763647824 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1111 | likely_benign | 0.1122 | benign | -0.84 | Destabilizing | 0.148 | N | 0.197 | neutral | None | None | None | None | I |
S/C | 0.1794 | likely_benign | 0.1806 | benign | -0.616 | Destabilizing | 0.999 | D | 0.381 | neutral | N | 0.491095491 | None | None | I |
S/D | 0.8415 | likely_pathogenic | 0.8508 | pathogenic | -0.376 | Destabilizing | 0.984 | D | 0.373 | neutral | None | None | None | None | I |
S/E | 0.9142 | likely_pathogenic | 0.9237 | pathogenic | -0.328 | Destabilizing | 0.984 | D | 0.363 | neutral | None | None | None | None | I |
S/F | 0.6974 | likely_pathogenic | 0.7231 | pathogenic | -0.873 | Destabilizing | 0.999 | D | 0.386 | neutral | None | None | None | None | I |
S/G | 0.1109 | likely_benign | 0.1156 | benign | -1.139 | Destabilizing | 0.01 | N | 0.165 | neutral | N | 0.415309654 | None | None | I |
S/H | 0.7542 | likely_pathogenic | 0.7865 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.376 | neutral | None | None | None | None | I |
S/I | 0.4567 | ambiguous | 0.479 | ambiguous | -0.135 | Destabilizing | 0.994 | D | 0.386 | neutral | N | 0.465964973 | None | None | I |
S/K | 0.9487 | likely_pathogenic | 0.9598 | pathogenic | -0.634 | Destabilizing | 0.984 | D | 0.381 | neutral | None | None | None | None | I |
S/L | 0.3664 | ambiguous | 0.3832 | ambiguous | -0.135 | Destabilizing | 0.969 | D | 0.392 | neutral | None | None | None | None | I |
S/M | 0.4734 | ambiguous | 0.4884 | ambiguous | 0.072 | Stabilizing | 1.0 | D | 0.377 | neutral | None | None | None | None | I |
S/N | 0.4292 | ambiguous | 0.4523 | ambiguous | -0.749 | Destabilizing | 0.979 | D | 0.453 | neutral | N | 0.495213232 | None | None | I |
S/P | 0.9456 | likely_pathogenic | 0.9542 | pathogenic | -0.336 | Destabilizing | 0.995 | D | 0.391 | neutral | None | None | None | None | I |
S/Q | 0.8568 | likely_pathogenic | 0.8747 | pathogenic | -0.821 | Destabilizing | 0.999 | D | 0.413 | neutral | None | None | None | None | I |
S/R | 0.903 | likely_pathogenic | 0.9176 | pathogenic | -0.635 | Destabilizing | 0.994 | D | 0.405 | neutral | D | 0.522783835 | None | None | I |
S/T | 0.1619 | likely_benign | 0.1721 | benign | -0.738 | Destabilizing | 0.959 | D | 0.387 | neutral | N | 0.468045273 | None | None | I |
S/V | 0.4111 | ambiguous | 0.4305 | ambiguous | -0.336 | Destabilizing | 0.969 | D | 0.401 | neutral | None | None | None | None | I |
S/W | 0.8543 | likely_pathogenic | 0.8677 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.506 | neutral | None | None | None | None | I |
S/Y | 0.6134 | likely_pathogenic | 0.6328 | pathogenic | -0.567 | Destabilizing | 0.999 | D | 0.391 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.