Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5940 | 18043;18044;18045 | chr2:178730715;178730714;178730713 | chr2:179595442;179595441;179595440 |
N2AB | 5623 | 17092;17093;17094 | chr2:178730715;178730714;178730713 | chr2:179595442;179595441;179595440 |
N2A | 4696 | 14311;14312;14313 | chr2:178730715;178730714;178730713 | chr2:179595442;179595441;179595440 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs374882815 | -1.557 | 0.879 | D | 0.875 | 0.726 | None | gnomAD-2.1.1 | 1.4374E-04 | None | None | disulfide | None | N | None | 0 | 0 | None | 9.71E-05 | 0 | None | 0 | None | 4E-05 | 2.8477E-04 | 2.82566E-04 |
C/R | rs374882815 | -1.557 | 0.879 | D | 0.875 | 0.726 | None | gnomAD-3.1.2 | 1.24857E-04 | None | None | disulfide | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 1.88395E-04 | 0 | 2.35225E-04 | 0 | 0 |
C/R | rs374882815 | -1.557 | 0.879 | D | 0.875 | 0.726 | None | gnomAD-4.0.0 | 1.11564E-04 | None | None | disulfide | None | N | None | 0 | 1.66778E-05 | None | 3.37998E-05 | 0 | None | 7.81397E-05 | 1.64582E-04 | 1.43267E-04 | 2.1965E-05 | 1.60149E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.869 | likely_pathogenic | 0.8412 | pathogenic | -1.258 | Destabilizing | 0.358 | N | 0.697 | prob.neutral | None | None | disulfide | None | N |
C/D | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -1.603 | Destabilizing | 0.967 | D | 0.875 | deleterious | None | None | disulfide | None | N |
C/E | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.35 | Destabilizing | 0.906 | D | 0.871 | deleterious | None | None | disulfide | None | N |
C/F | 0.9593 | likely_pathogenic | 0.9459 | pathogenic | -0.727 | Destabilizing | 0.642 | D | 0.848 | deleterious | D | 0.564218507 | disulfide | None | N |
C/G | 0.6318 | likely_pathogenic | 0.5653 | pathogenic | -1.591 | Destabilizing | 0.782 | D | 0.86 | deleterious | D | 0.534757947 | disulfide | None | N |
C/H | 0.9986 | likely_pathogenic | 0.9984 | pathogenic | -1.773 | Destabilizing | 0.991 | D | 0.879 | deleterious | None | None | disulfide | None | N |
C/I | 0.953 | likely_pathogenic | 0.9416 | pathogenic | -0.346 | Destabilizing | 0.906 | D | 0.795 | deleterious | None | None | disulfide | None | N |
C/K | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -0.855 | Destabilizing | 0.906 | D | 0.876 | deleterious | None | None | disulfide | None | N |
C/L | 0.9611 | likely_pathogenic | 0.948 | pathogenic | -0.346 | Destabilizing | 0.404 | N | 0.765 | deleterious | None | None | disulfide | None | N |
C/M | 0.9697 | likely_pathogenic | 0.9596 | pathogenic | -0.259 | Destabilizing | 0.991 | D | 0.785 | deleterious | None | None | disulfide | None | N |
C/N | 0.9914 | likely_pathogenic | 0.9904 | pathogenic | -1.587 | Destabilizing | 0.967 | D | 0.878 | deleterious | None | None | disulfide | None | N |
C/P | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.631 | Destabilizing | 0.967 | D | 0.875 | deleterious | None | None | disulfide | None | N |
C/Q | 0.999 | likely_pathogenic | 0.9988 | pathogenic | -1.057 | Destabilizing | 0.967 | D | 0.887 | deleterious | None | None | disulfide | None | N |
C/R | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -1.39 | Destabilizing | 0.879 | D | 0.875 | deleterious | D | 0.564471997 | disulfide | None | N |
C/S | 0.8979 | likely_pathogenic | 0.8841 | pathogenic | -1.769 | Destabilizing | 0.879 | D | 0.815 | deleterious | D | 0.537720461 | disulfide | None | N |
C/T | 0.9428 | likely_pathogenic | 0.9306 | pathogenic | -1.35 | Destabilizing | 0.906 | D | 0.807 | deleterious | None | None | disulfide | None | N |
C/V | 0.8607 | likely_pathogenic | 0.829 | pathogenic | -0.631 | Destabilizing | 0.733 | D | 0.801 | deleterious | None | None | disulfide | None | N |
C/W | 0.9972 | likely_pathogenic | 0.9963 | pathogenic | -1.206 | Destabilizing | 0.007 | N | 0.693 | prob.neutral | D | 0.564471997 | disulfide | None | N |
C/Y | 0.9898 | likely_pathogenic | 0.9882 | pathogenic | -0.929 | Destabilizing | 0.642 | D | 0.848 | deleterious | D | 0.552862202 | disulfide | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.