Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5949 | 18070;18071;18072 | chr2:178730688;178730687;178730686 | chr2:179595415;179595414;179595413 |
N2AB | 5632 | 17119;17120;17121 | chr2:178730688;178730687;178730686 | chr2:179595415;179595414;179595413 |
N2A | 4705 | 14338;14339;14340 | chr2:178730688;178730687;178730686 | chr2:179595415;179595414;179595413 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs368275231 | -0.598 | 0.625 | N | 0.416 | 0.33 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
S/G | rs368275231 | -0.598 | 0.625 | N | 0.416 | 0.33 | None | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85889E-06 | 0 | 0 |
S/N | rs1578154475 | None | 0.051 | N | 0.183 | 0.121 | 0.215869574891 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99539E-07 | 0 | 1.65673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0917 | likely_benign | 0.0843 | benign | -0.679 | Destabilizing | 0.525 | D | 0.337 | neutral | None | None | None | None | N |
S/C | 0.1996 | likely_benign | 0.1596 | benign | -0.485 | Destabilizing | 0.997 | D | 0.495 | neutral | D | 0.522945386 | None | None | N |
S/D | 0.3372 | likely_benign | 0.3481 | ambiguous | 0.304 | Stabilizing | 0.728 | D | 0.375 | neutral | None | None | None | None | N |
S/E | 0.482 | ambiguous | 0.4821 | ambiguous | 0.292 | Stabilizing | 0.842 | D | 0.374 | neutral | None | None | None | None | N |
S/F | 0.1982 | likely_benign | 0.1756 | benign | -1.047 | Destabilizing | 0.949 | D | 0.591 | neutral | None | None | None | None | N |
S/G | 0.1322 | likely_benign | 0.1371 | benign | -0.891 | Destabilizing | 0.625 | D | 0.416 | neutral | N | 0.501193826 | None | None | N |
S/H | 0.2774 | likely_benign | 0.2553 | benign | -1.288 | Destabilizing | 0.974 | D | 0.523 | neutral | None | None | None | None | N |
S/I | 0.1844 | likely_benign | 0.1681 | benign | -0.232 | Destabilizing | 0.669 | D | 0.543 | neutral | N | 0.488685432 | None | None | N |
S/K | 0.5827 | likely_pathogenic | 0.5638 | ambiguous | -0.444 | Destabilizing | 0.842 | D | 0.37 | neutral | None | None | None | None | N |
S/L | 0.1228 | likely_benign | 0.1078 | benign | -0.232 | Destabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | N |
S/M | 0.2232 | likely_benign | 0.1892 | benign | -0.153 | Destabilizing | 0.949 | D | 0.527 | neutral | None | None | None | None | N |
S/N | 0.1224 | likely_benign | 0.1229 | benign | -0.404 | Destabilizing | 0.051 | N | 0.183 | neutral | N | 0.503488786 | None | None | N |
S/P | 0.8625 | likely_pathogenic | 0.8936 | pathogenic | -0.349 | Destabilizing | 0.974 | D | 0.557 | neutral | None | None | None | None | N |
S/Q | 0.442 | ambiguous | 0.4188 | ambiguous | -0.486 | Destabilizing | 0.974 | D | 0.479 | neutral | None | None | None | None | N |
S/R | 0.4617 | ambiguous | 0.4743 | ambiguous | -0.382 | Destabilizing | 0.966 | D | 0.547 | neutral | N | 0.48392159 | None | None | N |
S/T | 0.0708 | likely_benign | 0.0663 | benign | -0.462 | Destabilizing | 0.022 | N | 0.123 | neutral | N | 0.4404961 | None | None | N |
S/V | 0.1967 | likely_benign | 0.1697 | benign | -0.349 | Destabilizing | 0.728 | D | 0.502 | neutral | None | None | None | None | N |
S/W | 0.4037 | ambiguous | 0.3937 | ambiguous | -1.037 | Destabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
S/Y | 0.1821 | likely_benign | 0.172 | benign | -0.744 | Destabilizing | 0.991 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.