Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5955 | 18088;18089;18090 | chr2:178730670;178730669;178730668 | chr2:179595397;179595396;179595395 |
N2AB | 5638 | 17137;17138;17139 | chr2:178730670;178730669;178730668 | chr2:179595397;179595396;179595395 |
N2A | 4711 | 14356;14357;14358 | chr2:178730670;178730669;178730668 | chr2:179595397;179595396;179595395 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.978 | N | 0.533 | 0.372 | 0.200317383148 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4148 | ambiguous | 0.4132 | ambiguous | -0.59 | Destabilizing | 0.978 | D | 0.544 | neutral | N | 0.493135754 | None | None | N |
D/C | 0.8611 | likely_pathogenic | 0.8587 | pathogenic | -0.14 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/E | 0.2853 | likely_benign | 0.2896 | benign | -0.564 | Destabilizing | 0.37 | N | 0.263 | neutral | N | 0.493249496 | None | None | N |
D/F | 0.8838 | likely_pathogenic | 0.8941 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
D/G | 0.168 | likely_benign | 0.1636 | benign | -0.859 | Destabilizing | 0.978 | D | 0.533 | neutral | N | 0.509909673 | None | None | N |
D/H | 0.6375 | likely_pathogenic | 0.6272 | pathogenic | -0.584 | Destabilizing | 0.999 | D | 0.598 | neutral | D | 0.529686659 | None | None | N |
D/I | 0.8785 | likely_pathogenic | 0.8908 | pathogenic | 0.096 | Stabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/K | 0.7237 | likely_pathogenic | 0.7257 | pathogenic | -0.229 | Destabilizing | 0.983 | D | 0.554 | neutral | None | None | None | None | N |
D/L | 0.7981 | likely_pathogenic | 0.7949 | pathogenic | 0.096 | Stabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/M | 0.8881 | likely_pathogenic | 0.8878 | pathogenic | 0.474 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/N | 0.1159 | likely_benign | 0.1124 | benign | -0.523 | Destabilizing | 0.576 | D | 0.256 | neutral | N | 0.461075576 | None | None | N |
D/P | 0.9904 | likely_pathogenic | 0.9901 | pathogenic | -0.109 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
D/Q | 0.6419 | likely_pathogenic | 0.6358 | pathogenic | -0.449 | Destabilizing | 0.995 | D | 0.573 | neutral | None | None | None | None | N |
D/R | 0.7543 | likely_pathogenic | 0.7477 | pathogenic | -0.059 | Destabilizing | 0.995 | D | 0.624 | neutral | None | None | None | None | N |
D/S | 0.2844 | likely_benign | 0.2794 | benign | -0.694 | Destabilizing | 0.983 | D | 0.473 | neutral | None | None | None | None | N |
D/T | 0.7202 | likely_pathogenic | 0.726 | pathogenic | -0.485 | Destabilizing | 0.995 | D | 0.547 | neutral | None | None | None | None | N |
D/V | 0.7013 | likely_pathogenic | 0.7196 | pathogenic | -0.109 | Destabilizing | 0.997 | D | 0.684 | prob.neutral | N | 0.498010826 | None | None | N |
D/W | 0.9694 | likely_pathogenic | 0.97 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/Y | 0.5142 | ambiguous | 0.5303 | ambiguous | -0.194 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | N | 0.511835893 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.