Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5961 | 18106;18107;18108 | chr2:178730652;178730651;178730650 | chr2:179595379;179595378;179595377 |
N2AB | 5644 | 17155;17156;17157 | chr2:178730652;178730651;178730650 | chr2:179595379;179595378;179595377 |
N2A | 4717 | 14374;14375;14376 | chr2:178730652;178730651;178730650 | chr2:179595379;179595378;179595377 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs2080285790 | None | 0.103 | N | 0.212 | 0.089 | 0.203808441222 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
A/T | rs2080285790 | None | 0.103 | N | 0.212 | 0.089 | 0.203808441222 | gnomAD-4.0.0 | 6.57428E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
A/V | rs909915866 | None | 0.896 | N | 0.369 | 0.235 | 0.374434639691 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5903 | likely_pathogenic | 0.5717 | pathogenic | -0.784 | Destabilizing | 0.999 | D | 0.43 | neutral | None | None | None | None | N |
A/D | 0.2779 | likely_benign | 0.2748 | benign | 0.229 | Stabilizing | 0.059 | N | 0.261 | neutral | N | 0.474107241 | None | None | N |
A/E | 0.2588 | likely_benign | 0.2749 | benign | 0.137 | Stabilizing | 0.851 | D | 0.409 | neutral | None | None | None | None | N |
A/F | 0.3639 | ambiguous | 0.3762 | ambiguous | -0.582 | Destabilizing | 0.996 | D | 0.55 | neutral | None | None | None | None | N |
A/G | 0.1408 | likely_benign | 0.1371 | benign | -0.358 | Destabilizing | 0.896 | D | 0.347 | neutral | N | 0.491327565 | None | None | N |
A/H | 0.456 | ambiguous | 0.455 | ambiguous | -0.267 | Destabilizing | 0.999 | D | 0.546 | neutral | None | None | None | None | N |
A/I | 0.2615 | likely_benign | 0.277 | benign | -0.117 | Destabilizing | 0.976 | D | 0.451 | neutral | None | None | None | None | N |
A/K | 0.4382 | ambiguous | 0.4586 | ambiguous | -0.446 | Destabilizing | 0.919 | D | 0.415 | neutral | None | None | None | None | N |
A/L | 0.1798 | likely_benign | 0.1866 | benign | -0.117 | Destabilizing | 0.919 | D | 0.413 | neutral | None | None | None | None | N |
A/M | 0.2643 | likely_benign | 0.2785 | benign | -0.43 | Destabilizing | 0.999 | D | 0.49 | neutral | None | None | None | None | N |
A/N | 0.2387 | likely_benign | 0.238 | benign | -0.269 | Destabilizing | 0.976 | D | 0.477 | neutral | None | None | None | None | N |
A/P | 0.1022 | likely_benign | 0.0955 | benign | -0.124 | Destabilizing | 0.059 | N | 0.21 | neutral | N | 0.436415645 | None | None | N |
A/Q | 0.3333 | likely_benign | 0.3436 | ambiguous | -0.379 | Destabilizing | 0.988 | D | 0.461 | neutral | None | None | None | None | N |
A/R | 0.405 | ambiguous | 0.4211 | ambiguous | -0.178 | Destabilizing | 0.988 | D | 0.454 | neutral | None | None | None | None | N |
A/S | 0.0899 | likely_benign | 0.0884 | benign | -0.607 | Destabilizing | 0.251 | N | 0.213 | neutral | N | 0.393411442 | None | None | N |
A/T | 0.0899 | likely_benign | 0.093 | benign | -0.587 | Destabilizing | 0.103 | N | 0.212 | neutral | N | 0.440456027 | None | None | N |
A/V | 0.1373 | likely_benign | 0.1447 | benign | -0.124 | Destabilizing | 0.896 | D | 0.369 | neutral | N | 0.498696254 | None | None | N |
A/W | 0.7534 | likely_pathogenic | 0.7654 | pathogenic | -0.776 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | N |
A/Y | 0.4691 | ambiguous | 0.4875 | ambiguous | -0.401 | Destabilizing | 0.996 | D | 0.546 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.