Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5962 | 18109;18110;18111 | chr2:178730649;178730648;178730647 | chr2:179595376;179595375;179595374 |
N2AB | 5645 | 17158;17159;17160 | chr2:178730649;178730648;178730647 | chr2:179595376;179595375;179595374 |
N2A | 4718 | 14377;14378;14379 | chr2:178730649;178730648;178730647 | chr2:179595376;179595375;179595374 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.001 | N | 0.135 | 0.06 | 0.110078149338 | gnomAD-4.0.0 | 2.05278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6986E-06 | 0 | 0 |
S/I | None | None | 0.963 | N | 0.375 | 0.399 | 0.405839309607 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.21507E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1662 | likely_benign | 0.1588 | benign | -0.469 | Destabilizing | 0.25 | N | 0.377 | neutral | None | None | None | None | N |
S/C | 0.2634 | likely_benign | 0.2275 | benign | -0.353 | Destabilizing | 0.99 | D | 0.304 | neutral | N | 0.475676609 | None | None | N |
S/D | 0.4847 | ambiguous | 0.4547 | ambiguous | 0.604 | Stabilizing | 0.002 | N | 0.143 | neutral | None | None | None | None | N |
S/E | 0.8027 | likely_pathogenic | 0.8003 | pathogenic | 0.545 | Stabilizing | 0.25 | N | 0.384 | neutral | None | None | None | None | N |
S/F | 0.6085 | likely_pathogenic | 0.5938 | pathogenic | -0.998 | Destabilizing | 0.972 | D | 0.361 | neutral | None | None | None | None | N |
S/G | 0.087 | likely_benign | 0.0813 | benign | -0.609 | Destabilizing | 0.001 | N | 0.135 | neutral | N | 0.412284338 | None | None | N |
S/H | 0.6533 | likely_pathogenic | 0.6413 | pathogenic | -0.958 | Destabilizing | 0.972 | D | 0.28 | neutral | None | None | None | None | N |
S/I | 0.6101 | likely_pathogenic | 0.609 | pathogenic | -0.227 | Destabilizing | 0.963 | D | 0.375 | neutral | N | 0.477562713 | None | None | N |
S/K | 0.883 | likely_pathogenic | 0.881 | pathogenic | -0.3 | Destabilizing | 0.617 | D | 0.362 | neutral | None | None | None | None | N |
S/L | 0.2291 | likely_benign | 0.2165 | benign | -0.227 | Destabilizing | 0.766 | D | 0.371 | neutral | None | None | None | None | N |
S/M | 0.4103 | ambiguous | 0.3907 | ambiguous | -0.196 | Destabilizing | 0.992 | D | 0.283 | neutral | None | None | None | None | N |
S/N | 0.1978 | likely_benign | 0.1821 | benign | -0.152 | Destabilizing | 0.549 | D | 0.425 | neutral | N | 0.485128658 | None | None | N |
S/P | 0.843 | likely_pathogenic | 0.8151 | pathogenic | -0.278 | Destabilizing | 0.972 | D | 0.308 | neutral | None | None | None | None | N |
S/Q | 0.7948 | likely_pathogenic | 0.7915 | pathogenic | -0.283 | Destabilizing | 0.92 | D | 0.365 | neutral | None | None | None | None | N |
S/R | 0.8444 | likely_pathogenic | 0.8358 | pathogenic | -0.171 | Destabilizing | 0.896 | D | 0.313 | neutral | N | 0.467661212 | None | None | N |
S/T | 0.0893 | likely_benign | 0.0862 | benign | -0.271 | Destabilizing | 0.712 | D | 0.421 | neutral | N | 0.509082954 | None | None | N |
S/V | 0.5181 | ambiguous | 0.5055 | ambiguous | -0.278 | Destabilizing | 0.92 | D | 0.394 | neutral | None | None | None | None | N |
S/W | 0.7355 | likely_pathogenic | 0.7115 | pathogenic | -1.013 | Destabilizing | 0.992 | D | 0.489 | neutral | None | None | None | None | N |
S/Y | 0.5659 | likely_pathogenic | 0.5431 | ambiguous | -0.712 | Destabilizing | 0.972 | D | 0.361 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.