Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5965 | 18118;18119;18120 | chr2:178730640;178730639;178730638 | chr2:179595367;179595366;179595365 |
N2AB | 5648 | 17167;17168;17169 | chr2:178730640;178730639;178730638 | chr2:179595367;179595366;179595365 |
N2A | 4721 | 14386;14387;14388 | chr2:178730640;178730639;178730638 | chr2:179595367;179595366;179595365 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs752226947 | -1.383 | None | N | 0.131 | 0.117 | 0.26547132957 | gnomAD-2.1.1 | 5.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.09728E-04 | 0 |
Y/H | rs752226947 | -1.383 | None | N | 0.131 | 0.117 | 0.26547132957 | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.32341E-04 | 0 | 0 |
Y/H | rs752226947 | -1.383 | None | N | 0.131 | 0.117 | 0.26547132957 | gnomAD-4.0.0 | 2.60307E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.13644E-05 | 0 | 8.00743E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8426 | likely_pathogenic | 0.7422 | pathogenic | -2.543 | Highly Destabilizing | 0.272 | N | 0.547 | neutral | None | None | None | None | N |
Y/C | 0.2127 | likely_benign | 0.1442 | benign | -1.825 | Destabilizing | 0.958 | D | 0.652 | neutral | N | 0.502915346 | None | None | N |
Y/D | 0.847 | likely_pathogenic | 0.7356 | pathogenic | -2.028 | Highly Destabilizing | 0.497 | N | 0.617 | neutral | N | 0.508853602 | None | None | N |
Y/E | 0.8772 | likely_pathogenic | 0.782 | pathogenic | -1.828 | Destabilizing | 0.157 | N | 0.567 | neutral | None | None | None | None | N |
Y/F | 0.1478 | likely_benign | 0.1334 | benign | -0.876 | Destabilizing | 0.22 | N | 0.514 | neutral | N | 0.509027891 | None | None | N |
Y/G | 0.808 | likely_pathogenic | 0.7116 | pathogenic | -2.966 | Highly Destabilizing | 0.272 | N | 0.605 | neutral | None | None | None | None | N |
Y/H | 0.2635 | likely_benign | 0.1426 | benign | -1.596 | Destabilizing | None | N | 0.131 | neutral | N | 0.504584864 | None | None | N |
Y/I | 0.6071 | likely_pathogenic | 0.5065 | ambiguous | -1.181 | Destabilizing | 0.726 | D | 0.585 | neutral | None | None | None | None | N |
Y/K | 0.8326 | likely_pathogenic | 0.7148 | pathogenic | -1.833 | Destabilizing | 0.567 | D | 0.565 | neutral | None | None | None | None | N |
Y/L | 0.5999 | likely_pathogenic | 0.4923 | ambiguous | -1.181 | Destabilizing | 0.272 | N | 0.515 | neutral | None | None | None | None | N |
Y/M | 0.7213 | likely_pathogenic | 0.6443 | pathogenic | -1.14 | Destabilizing | 0.968 | D | 0.583 | neutral | None | None | None | None | N |
Y/N | 0.4371 | ambiguous | 0.2873 | benign | -2.519 | Highly Destabilizing | 0.124 | N | 0.553 | neutral | N | 0.518804329 | None | None | N |
Y/P | 0.9876 | likely_pathogenic | 0.9743 | pathogenic | -1.642 | Destabilizing | 0.726 | D | 0.685 | prob.neutral | None | None | None | None | N |
Y/Q | 0.7193 | likely_pathogenic | 0.5319 | ambiguous | -2.22 | Highly Destabilizing | 0.567 | D | 0.587 | neutral | None | None | None | None | N |
Y/R | 0.6668 | likely_pathogenic | 0.4933 | ambiguous | -1.698 | Destabilizing | 0.567 | D | 0.582 | neutral | None | None | None | None | N |
Y/S | 0.6569 | likely_pathogenic | 0.512 | ambiguous | -3.065 | Highly Destabilizing | 0.22 | N | 0.555 | neutral | N | 0.506522971 | None | None | N |
Y/T | 0.7374 | likely_pathogenic | 0.5912 | pathogenic | -2.738 | Highly Destabilizing | 0.567 | D | 0.582 | neutral | None | None | None | None | N |
Y/V | 0.4913 | ambiguous | 0.4026 | ambiguous | -1.642 | Destabilizing | 0.431 | N | 0.519 | neutral | None | None | None | None | N |
Y/W | 0.5573 | ambiguous | 0.4575 | ambiguous | -0.249 | Destabilizing | 0.968 | D | 0.53 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.