Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5966 | 18121;18122;18123 | chr2:178730637;178730636;178730635 | chr2:179595364;179595363;179595362 |
N2AB | 5649 | 17170;17171;17172 | chr2:178730637;178730636;178730635 | chr2:179595364;179595363;179595362 |
N2A | 4722 | 14389;14390;14391 | chr2:178730637;178730636;178730635 | chr2:179595364;179595363;179595362 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1469567732 | -0.896 | 0.999 | N | 0.667 | 0.501 | 0.462809833587 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/T | rs1469567732 | -0.896 | 0.999 | N | 0.667 | 0.501 | 0.462809833587 | gnomAD-4.0.0 | 2.73703E-06 | None | None | None | None | N | None | 0 | 2.23644E-05 | None | 0 | 0 | None | 0 | 0 | 2.69862E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5499 | ambiguous | 0.5574 | ambiguous | -0.599 | Destabilizing | 0.998 | D | 0.546 | neutral | None | None | None | None | N |
K/C | 0.7775 | likely_pathogenic | 0.7707 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/D | 0.7348 | likely_pathogenic | 0.7515 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/E | 0.3622 | ambiguous | 0.3811 | ambiguous | -0.079 | Destabilizing | 0.996 | D | 0.46 | neutral | N | 0.490788847 | None | None | N |
K/F | 0.8732 | likely_pathogenic | 0.8871 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
K/G | 0.6751 | likely_pathogenic | 0.6841 | pathogenic | -0.929 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
K/H | 0.2774 | likely_benign | 0.2924 | benign | -1.325 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/I | 0.4718 | ambiguous | 0.5106 | ambiguous | 0.24 | Stabilizing | 1.0 | D | 0.771 | deleterious | D | 0.52322934 | None | None | N |
K/L | 0.5035 | ambiguous | 0.5084 | ambiguous | 0.24 | Stabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
K/M | 0.3904 | ambiguous | 0.3998 | ambiguous | 0.192 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/N | 0.5183 | ambiguous | 0.5407 | ambiguous | -0.427 | Destabilizing | 0.999 | D | 0.615 | neutral | D | 0.529037804 | None | None | N |
K/P | 0.9566 | likely_pathogenic | 0.956 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/Q | 0.1704 | likely_benign | 0.1804 | benign | -0.603 | Destabilizing | 0.999 | D | 0.595 | neutral | N | 0.418774033 | None | None | N |
K/R | 0.0814 | likely_benign | 0.0875 | benign | -0.528 | Destabilizing | 0.64 | D | 0.275 | neutral | N | 0.423814494 | None | None | N |
K/S | 0.5372 | ambiguous | 0.5526 | ambiguous | -1.127 | Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
K/T | 0.2436 | likely_benign | 0.2548 | benign | -0.842 | Destabilizing | 0.999 | D | 0.667 | neutral | N | 0.492906433 | None | None | N |
K/V | 0.4497 | ambiguous | 0.4751 | ambiguous | -0.01 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/W | 0.8329 | likely_pathogenic | 0.842 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/Y | 0.715 | likely_pathogenic | 0.725 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.