Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5975 | 18148;18149;18150 | chr2:178730610;178730609;178730608 | chr2:179595337;179595336;179595335 |
N2AB | 5658 | 17197;17198;17199 | chr2:178730610;178730609;178730608 | chr2:179595337;179595336;179595335 |
N2A | 4731 | 14416;14417;14418 | chr2:178730610;178730609;178730608 | chr2:179595337;179595336;179595335 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | rs776879045 | -1.886 | 0.98 | N | 0.579 | 0.379 | 0.662754131768 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
F/V | rs776879045 | -1.886 | 0.98 | N | 0.579 | 0.379 | 0.662754131768 | gnomAD-4.0.0 | 1.59157E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85907E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6635 | likely_pathogenic | 0.6799 | pathogenic | -2.405 | Highly Destabilizing | 0.871 | D | 0.591 | neutral | None | None | None | None | N |
F/C | 0.4721 | ambiguous | 0.4904 | ambiguous | -0.96 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.474915318 | None | None | N |
F/D | 0.9117 | likely_pathogenic | 0.9156 | pathogenic | -2.012 | Highly Destabilizing | 0.991 | D | 0.689 | prob.neutral | None | None | None | None | N |
F/E | 0.8824 | likely_pathogenic | 0.8851 | pathogenic | -1.965 | Destabilizing | 0.991 | D | 0.692 | prob.neutral | None | None | None | None | N |
F/G | 0.8835 | likely_pathogenic | 0.8852 | pathogenic | -2.716 | Highly Destabilizing | 0.97 | D | 0.656 | neutral | None | None | None | None | N |
F/H | 0.5915 | likely_pathogenic | 0.5941 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
F/I | 0.2702 | likely_benign | 0.3033 | benign | -1.453 | Destabilizing | 0.994 | D | 0.537 | neutral | N | 0.465506401 | None | None | N |
F/K | 0.8117 | likely_pathogenic | 0.8199 | pathogenic | -1.032 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
F/L | 0.888 | likely_pathogenic | 0.8933 | pathogenic | -1.453 | Destabilizing | 0.98 | D | 0.487 | neutral | N | 0.437685081 | None | None | N |
F/M | 0.5704 | likely_pathogenic | 0.5806 | pathogenic | -0.986 | Destabilizing | 0.999 | D | 0.54 | neutral | None | None | None | None | N |
F/N | 0.7079 | likely_pathogenic | 0.7203 | pathogenic | -0.985 | Destabilizing | 0.991 | D | 0.74 | deleterious | None | None | None | None | N |
F/P | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -1.767 | Destabilizing | 0.996 | D | 0.779 | deleterious | None | None | None | None | N |
F/Q | 0.7727 | likely_pathogenic | 0.7719 | pathogenic | -1.209 | Destabilizing | 0.996 | D | 0.781 | deleterious | None | None | None | None | N |
F/R | 0.696 | likely_pathogenic | 0.7041 | pathogenic | -0.297 | Destabilizing | 0.996 | D | 0.778 | deleterious | None | None | None | None | N |
F/S | 0.4698 | ambiguous | 0.4792 | ambiguous | -1.631 | Destabilizing | 0.489 | N | 0.418 | neutral | N | 0.361453739 | None | None | N |
F/T | 0.5872 | likely_pathogenic | 0.5969 | pathogenic | -1.495 | Destabilizing | 0.942 | D | 0.629 | neutral | None | None | None | None | N |
F/V | 0.2774 | likely_benign | 0.2999 | benign | -1.767 | Destabilizing | 0.98 | D | 0.579 | neutral | N | 0.447382 | None | None | N |
F/W | 0.6655 | likely_pathogenic | 0.6486 | pathogenic | -0.794 | Destabilizing | 1.0 | D | 0.53 | neutral | None | None | None | None | N |
F/Y | 0.1964 | likely_benign | 0.1994 | benign | -0.936 | Destabilizing | 0.993 | D | 0.521 | neutral | N | 0.48426552 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.