Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5979 | 18160;18161;18162 | chr2:178730598;178730597;178730596 | chr2:179595325;179595324;179595323 |
N2AB | 5662 | 17209;17210;17211 | chr2:178730598;178730597;178730596 | chr2:179595325;179595324;179595323 |
N2A | 4735 | 14428;14429;14430 | chr2:178730598;178730597;178730596 | chr2:179595325;179595324;179595323 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1188866592 | None | 0.002 | N | 0.079 | 0.154 | 0.187945064343 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0964 | likely_benign | 0.0951 | benign | -0.856 | Destabilizing | 0.495 | N | 0.283 | neutral | None | None | None | None | N |
S/C | 0.1141 | likely_benign | 0.1194 | benign | -0.693 | Destabilizing | 0.013 | N | 0.209 | neutral | N | 0.515259157 | None | None | N |
S/D | 0.2964 | likely_benign | 0.3468 | ambiguous | -0.766 | Destabilizing | 0.543 | D | 0.307 | neutral | None | None | None | None | N |
S/E | 0.4439 | ambiguous | 0.4871 | ambiguous | -0.665 | Destabilizing | 0.704 | D | 0.32 | neutral | None | None | None | None | N |
S/F | 0.2057 | likely_benign | 0.2128 | benign | -0.724 | Destabilizing | 0.893 | D | 0.513 | neutral | None | None | None | None | N |
S/G | 0.0847 | likely_benign | 0.0866 | benign | -1.19 | Destabilizing | 0.27 | N | 0.318 | neutral | N | 0.500509036 | None | None | N |
S/H | 0.2078 | likely_benign | 0.2288 | benign | -1.484 | Destabilizing | 0.944 | D | 0.445 | neutral | None | None | None | None | N |
S/I | 0.1496 | likely_benign | 0.1658 | benign | -0.042 | Destabilizing | 0.473 | N | 0.487 | neutral | D | 0.523594699 | None | None | N |
S/K | 0.4185 | ambiguous | 0.4841 | ambiguous | -0.529 | Destabilizing | 0.329 | N | 0.319 | neutral | None | None | None | None | N |
S/L | 0.1124 | likely_benign | 0.1112 | benign | -0.042 | Destabilizing | 0.007 | N | 0.25 | neutral | None | None | None | None | N |
S/M | 0.2012 | likely_benign | 0.2089 | benign | 0.001 | Stabilizing | 0.893 | D | 0.445 | neutral | None | None | None | None | N |
S/N | 0.0806 | likely_benign | 0.0963 | benign | -0.831 | Destabilizing | 0.002 | N | 0.079 | neutral | N | 0.462044808 | None | None | N |
S/P | 0.3003 | likely_benign | 0.2945 | benign | -0.279 | Destabilizing | 0.981 | D | 0.453 | neutral | None | None | None | None | N |
S/Q | 0.3567 | ambiguous | 0.3807 | ambiguous | -0.82 | Destabilizing | 0.893 | D | 0.394 | neutral | None | None | None | None | N |
S/R | 0.3352 | likely_benign | 0.3719 | ambiguous | -0.618 | Destabilizing | 0.006 | N | 0.219 | neutral | N | 0.500043049 | None | None | N |
S/T | 0.0803 | likely_benign | 0.0851 | benign | -0.717 | Destabilizing | 0.425 | N | 0.363 | neutral | N | 0.495271947 | None | None | N |
S/V | 0.1847 | likely_benign | 0.196 | benign | -0.279 | Destabilizing | 0.543 | D | 0.499 | neutral | None | None | None | None | N |
S/W | 0.3348 | likely_benign | 0.3474 | ambiguous | -0.774 | Destabilizing | 0.995 | D | 0.561 | neutral | None | None | None | None | N |
S/Y | 0.158 | likely_benign | 0.1727 | benign | -0.443 | Destabilizing | 0.981 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.