Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6022 | 18289;18290;18291 | chr2:178730336;178730335;178730334 | chr2:179595063;179595062;179595061 |
N2AB | 5705 | 17338;17339;17340 | chr2:178730336;178730335;178730334 | chr2:179595063;179595062;179595061 |
N2A | 4778 | 14557;14558;14559 | chr2:178730336;178730335;178730334 | chr2:179595063;179595062;179595061 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs767465221 | 0.173 | 0.046 | N | 0.131 | 0.166 | 0.215109475489 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.69E-05 | 0 | 0 |
D/N | rs767465221 | 0.173 | 0.046 | N | 0.131 | 0.166 | 0.215109475489 | gnomAD-4.0.0 | 1.60502E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88736E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1777 | likely_benign | 0.1536 | benign | -0.383 | Destabilizing | 0.896 | D | 0.535 | neutral | N | 0.484398806 | None | None | N |
D/C | 0.7048 | likely_pathogenic | 0.662 | pathogenic | -0.227 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
D/E | 0.1532 | likely_benign | 0.1487 | benign | -0.385 | Destabilizing | 0.026 | N | 0.135 | neutral | N | 0.460308438 | None | None | N |
D/F | 0.563 | ambiguous | 0.5185 | ambiguous | 0.142 | Stabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
D/G | 0.2725 | likely_benign | 0.2337 | benign | -0.686 | Destabilizing | 0.896 | D | 0.539 | neutral | N | 0.519455529 | None | None | N |
D/H | 0.3207 | likely_benign | 0.2861 | benign | 0.177 | Stabilizing | 0.984 | D | 0.567 | neutral | N | 0.519628887 | None | None | N |
D/I | 0.2647 | likely_benign | 0.2529 | benign | 0.402 | Stabilizing | 0.988 | D | 0.661 | neutral | None | None | None | None | N |
D/K | 0.424 | ambiguous | 0.37 | ambiguous | 0.041 | Stabilizing | 0.851 | D | 0.519 | neutral | None | None | None | None | N |
D/L | 0.3536 | ambiguous | 0.3249 | benign | 0.402 | Stabilizing | 0.976 | D | 0.619 | neutral | None | None | None | None | N |
D/M | 0.5396 | ambiguous | 0.5102 | ambiguous | 0.528 | Stabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
D/N | 0.1177 | likely_benign | 0.1094 | benign | -0.537 | Destabilizing | 0.046 | N | 0.131 | neutral | N | 0.460753942 | None | None | N |
D/P | 0.7539 | likely_pathogenic | 0.6966 | pathogenic | 0.165 | Stabilizing | 0.988 | D | 0.553 | neutral | None | None | None | None | N |
D/Q | 0.3653 | ambiguous | 0.3222 | benign | -0.414 | Destabilizing | 0.952 | D | 0.493 | neutral | None | None | None | None | N |
D/R | 0.4736 | ambiguous | 0.4121 | ambiguous | 0.335 | Stabilizing | 0.976 | D | 0.57 | neutral | None | None | None | None | N |
D/S | 0.1728 | likely_benign | 0.1517 | benign | -0.691 | Destabilizing | 0.919 | D | 0.544 | neutral | None | None | None | None | N |
D/T | 0.2297 | likely_benign | 0.2051 | benign | -0.434 | Destabilizing | 0.919 | D | 0.528 | neutral | None | None | None | None | N |
D/V | 0.1485 | likely_benign | 0.1411 | benign | 0.165 | Stabilizing | 0.984 | D | 0.639 | neutral | N | 0.458673642 | None | None | N |
D/W | 0.8789 | likely_pathogenic | 0.8493 | pathogenic | 0.39 | Stabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
D/Y | 0.216 | likely_benign | 0.1931 | benign | 0.41 | Stabilizing | 0.995 | D | 0.674 | neutral | N | 0.506064944 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.