Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6042 | 18349;18350;18351 | chr2:178730276;178730275;178730274 | chr2:179595003;179595002;179595001 |
N2AB | 5725 | 17398;17399;17400 | chr2:178730276;178730275;178730274 | chr2:179595003;179595002;179595001 |
N2A | 4798 | 14617;14618;14619 | chr2:178730276;178730275;178730274 | chr2:179595003;179595002;179595001 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.007 | N | 0.269 | 0.351 | 0.388174495139 | gnomAD-4.0.0 | 6.84621E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9975E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0737 | likely_benign | 0.0756 | benign | -0.604 | Destabilizing | 0.001 | N | 0.121 | neutral | D | 0.526266858 | None | None | I |
T/C | 0.4475 | ambiguous | 0.3931 | ambiguous | -0.334 | Destabilizing | 0.951 | D | 0.517 | neutral | None | None | None | None | I |
T/D | 0.2725 | likely_benign | 0.271 | benign | -0.098 | Destabilizing | 0.264 | N | 0.471 | neutral | None | None | None | None | I |
T/E | 0.2191 | likely_benign | 0.2236 | benign | -0.121 | Destabilizing | 0.264 | N | 0.453 | neutral | None | None | None | None | I |
T/F | 0.178 | likely_benign | 0.188 | benign | -0.764 | Destabilizing | 0.836 | D | 0.569 | neutral | None | None | None | None | I |
T/G | 0.2183 | likely_benign | 0.2157 | benign | -0.834 | Destabilizing | 0.129 | N | 0.415 | neutral | None | None | None | None | I |
T/H | 0.1752 | likely_benign | 0.1711 | benign | -1.11 | Destabilizing | 0.836 | D | 0.557 | neutral | None | None | None | None | I |
T/I | 0.1108 | likely_benign | 0.1122 | benign | -0.093 | Destabilizing | 0.007 | N | 0.269 | neutral | N | 0.50088743 | None | None | I |
T/K | 0.1523 | likely_benign | 0.1527 | benign | -0.678 | Destabilizing | 0.213 | N | 0.448 | neutral | N | 0.519935531 | None | None | I |
T/L | 0.0879 | likely_benign | 0.0918 | benign | -0.093 | Destabilizing | 0.129 | N | 0.404 | neutral | None | None | None | None | I |
T/M | 0.0764 | likely_benign | 0.0793 | benign | 0.106 | Stabilizing | 0.836 | D | 0.54 | neutral | None | None | None | None | I |
T/N | 0.0789 | likely_benign | 0.0831 | benign | -0.515 | Destabilizing | 0.01 | N | 0.24 | neutral | None | None | None | None | I |
T/P | 0.3396 | likely_benign | 0.3858 | ambiguous | -0.231 | Destabilizing | 0.794 | D | 0.579 | neutral | D | 0.531019554 | None | None | I |
T/Q | 0.1543 | likely_benign | 0.1571 | benign | -0.673 | Destabilizing | 0.022 | N | 0.263 | neutral | None | None | None | None | I |
T/R | 0.1354 | likely_benign | 0.1415 | benign | -0.426 | Destabilizing | 0.213 | N | 0.545 | neutral | D | 0.525189422 | None | None | I |
T/S | 0.0916 | likely_benign | 0.0931 | benign | -0.746 | Destabilizing | 0.002 | N | 0.143 | neutral | N | 0.487476396 | None | None | I |
T/V | 0.0968 | likely_benign | 0.0983 | benign | -0.231 | Destabilizing | 0.129 | N | 0.349 | neutral | None | None | None | None | I |
T/W | 0.5082 | ambiguous | 0.5278 | ambiguous | -0.744 | Destabilizing | 0.983 | D | 0.583 | neutral | None | None | None | None | I |
T/Y | 0.2105 | likely_benign | 0.2157 | benign | -0.505 | Destabilizing | 0.94 | D | 0.572 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.