Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6048 | 18367;18368;18369 | chr2:178730258;178730257;178730256 | chr2:179594985;179594984;179594983 |
N2AB | 5731 | 17416;17417;17418 | chr2:178730258;178730257;178730256 | chr2:179594985;179594984;179594983 |
N2A | 4804 | 14635;14636;14637 | chr2:178730258;178730257;178730256 | chr2:179594985;179594984;179594983 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1400771825 | -0.329 | 0.989 | N | 0.479 | 0.453 | 0.275641507738 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
D/G | rs1400771825 | -0.329 | 0.989 | N | 0.479 | 0.453 | 0.275641507738 | gnomAD-4.0.0 | 3.18501E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56143E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.376 | ambiguous | 0.2936 | benign | -0.006 | Destabilizing | 0.994 | D | 0.539 | neutral | N | 0.470752311 | None | None | N |
D/C | 0.8271 | likely_pathogenic | 0.7384 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
D/E | 0.255 | likely_benign | 0.208 | benign | -0.217 | Destabilizing | 0.973 | D | 0.419 | neutral | N | 0.456886051 | None | None | N |
D/F | 0.8123 | likely_pathogenic | 0.7377 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
D/G | 0.1445 | likely_benign | 0.1225 | benign | -0.144 | Destabilizing | 0.989 | D | 0.479 | neutral | N | 0.457923414 | None | None | N |
D/H | 0.5526 | ambiguous | 0.4458 | ambiguous | 0.331 | Stabilizing | 0.998 | D | 0.555 | neutral | N | 0.489363545 | None | None | N |
D/I | 0.8002 | likely_pathogenic | 0.6867 | pathogenic | 0.294 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/K | 0.6714 | likely_pathogenic | 0.5338 | ambiguous | 0.473 | Stabilizing | 0.992 | D | 0.517 | neutral | None | None | None | None | N |
D/L | 0.709 | likely_pathogenic | 0.6166 | pathogenic | 0.294 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/M | 0.8679 | likely_pathogenic | 0.7952 | pathogenic | 0.212 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
D/N | 0.1358 | likely_benign | 0.1153 | benign | 0.286 | Stabilizing | 0.333 | N | 0.235 | neutral | N | 0.456227117 | None | None | N |
D/P | 0.9612 | likely_pathogenic | 0.9349 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.554 | neutral | None | None | None | None | N |
D/Q | 0.5739 | likely_pathogenic | 0.4651 | ambiguous | 0.286 | Stabilizing | 0.999 | D | 0.505 | neutral | None | None | None | None | N |
D/R | 0.6776 | likely_pathogenic | 0.5577 | ambiguous | 0.654 | Stabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
D/S | 0.2775 | likely_benign | 0.2263 | benign | 0.172 | Stabilizing | 0.992 | D | 0.442 | neutral | None | None | None | None | N |
D/T | 0.6606 | likely_pathogenic | 0.5381 | ambiguous | 0.28 | Stabilizing | 0.992 | D | 0.517 | neutral | None | None | None | None | N |
D/V | 0.5718 | likely_pathogenic | 0.4505 | ambiguous | 0.215 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.468221097 | None | None | N |
D/W | 0.9397 | likely_pathogenic | 0.9027 | pathogenic | -0.036 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
D/Y | 0.3704 | ambiguous | 0.2979 | benign | 0.142 | Stabilizing | 0.999 | D | 0.672 | neutral | N | 0.484844095 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.