Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6055 | 18388;18389;18390 | chr2:178730237;178730236;178730235 | chr2:179594964;179594963;179594962 |
N2AB | 5738 | 17437;17438;17439 | chr2:178730237;178730236;178730235 | chr2:179594964;179594963;179594962 |
N2A | 4811 | 14656;14657;14658 | chr2:178730237;178730236;178730235 | chr2:179594964;179594963;179594962 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs879034244 | None | 0.669 | N | 0.373 | 0.246 | 0.407357902709 | gnomAD-4.0.0 | 2.7375E-06 | None | None | None | None | N | None | 0 | 2.23944E-05 | None | 0 | 0 | None | 0 | 0 | 1.79915E-06 | 0 | 1.65728E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2181 | likely_benign | 0.2497 | benign | -0.2 | Destabilizing | 0.454 | N | 0.401 | neutral | N | 0.466949969 | None | None | N |
G/C | 0.4672 | ambiguous | 0.5323 | ambiguous | -0.923 | Destabilizing | 0.998 | D | 0.459 | neutral | None | None | None | None | N |
G/D | 0.3299 | likely_benign | 0.4425 | ambiguous | -0.15 | Destabilizing | 0.016 | N | 0.277 | neutral | None | None | None | None | N |
G/E | 0.4657 | ambiguous | 0.5915 | pathogenic | -0.299 | Destabilizing | 0.669 | D | 0.373 | neutral | N | 0.470468688 | None | None | N |
G/F | 0.7949 | likely_pathogenic | 0.8414 | pathogenic | -0.863 | Destabilizing | 0.974 | D | 0.438 | neutral | None | None | None | None | N |
G/H | 0.645 | likely_pathogenic | 0.7084 | pathogenic | -0.332 | Destabilizing | 0.993 | D | 0.373 | neutral | None | None | None | None | N |
G/I | 0.5994 | likely_pathogenic | 0.6676 | pathogenic | -0.367 | Destabilizing | 0.949 | D | 0.449 | neutral | None | None | None | None | N |
G/K | 0.7051 | likely_pathogenic | 0.7715 | pathogenic | -0.592 | Destabilizing | 0.842 | D | 0.382 | neutral | None | None | None | None | N |
G/L | 0.6506 | likely_pathogenic | 0.7244 | pathogenic | -0.367 | Destabilizing | 0.904 | D | 0.45 | neutral | None | None | None | None | N |
G/M | 0.708 | likely_pathogenic | 0.7729 | pathogenic | -0.566 | Destabilizing | 0.998 | D | 0.432 | neutral | None | None | None | None | N |
G/N | 0.4054 | ambiguous | 0.482 | ambiguous | -0.323 | Destabilizing | 0.067 | N | 0.27 | neutral | None | None | None | None | N |
G/P | 0.9343 | likely_pathogenic | 0.9455 | pathogenic | -0.282 | Destabilizing | 0.974 | D | 0.401 | neutral | None | None | None | None | N |
G/Q | 0.6025 | likely_pathogenic | 0.6734 | pathogenic | -0.537 | Destabilizing | 0.974 | D | 0.397 | neutral | None | None | None | None | N |
G/R | 0.5613 | ambiguous | 0.6316 | pathogenic | -0.244 | Destabilizing | 0.934 | D | 0.399 | neutral | N | 0.511064466 | None | None | N |
G/S | 0.1031 | likely_benign | 0.126 | benign | -0.524 | Destabilizing | 0.172 | N | 0.193 | neutral | None | None | None | None | N |
G/T | 0.2007 | likely_benign | 0.2545 | benign | -0.591 | Destabilizing | 0.067 | N | 0.303 | neutral | None | None | None | None | N |
G/V | 0.3967 | ambiguous | 0.4659 | ambiguous | -0.282 | Destabilizing | 0.876 | D | 0.441 | neutral | N | 0.469534089 | None | None | N |
G/W | 0.7025 | likely_pathogenic | 0.7649 | pathogenic | -1.001 | Destabilizing | 0.998 | D | 0.493 | neutral | None | None | None | None | N |
G/Y | 0.7547 | likely_pathogenic | 0.8074 | pathogenic | -0.661 | Destabilizing | 0.991 | D | 0.433 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.