Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6058 | 18397;18398;18399 | chr2:178730228;178730227;178730226 | chr2:179594955;179594954;179594953 |
N2AB | 5741 | 17446;17447;17448 | chr2:178730228;178730227;178730226 | chr2:179594955;179594954;179594953 |
N2A | 4814 | 14665;14666;14667 | chr2:178730228;178730227;178730226 | chr2:179594955;179594954;179594953 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs189127014 | -1.729 | 0.079 | N | 0.367 | 0.273 | None | gnomAD-2.1.1 | 1.71635E-04 | None | None | None | None | N | None | 1.48908E-03 | 1.41812E-04 | None | 0 | 1.54512E-04 | None | 3.27E-05 | None | 0 | 2.35E-05 | 0 |
R/C | rs189127014 | -1.729 | 0.079 | N | 0.367 | 0.273 | None | gnomAD-3.1.2 | 4.73653E-04 | None | None | None | None | N | None | 1.4978E-03 | 3.93546E-04 | 0 | 0 | 1.93498E-04 | None | 0 | 0 | 0 | 2.07727E-04 | 9.56023E-04 |
R/C | rs189127014 | -1.729 | 0.079 | N | 0.367 | 0.273 | None | gnomAD-4.0.0 | 9.91744E-05 | None | None | None | None | N | None | 1.57384E-03 | 2.50292E-04 | None | 0 | 8.93296E-05 | None | 0 | 1.65071E-04 | 5.08639E-06 | 3.29533E-05 | 2.08167E-04 |
R/H | rs376012117 | -2.305 | 0.169 | N | 0.262 | 0.193 | 0.21737058555 | gnomAD-2.1.1 | 6.08E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.15E-05 | None | 0 | None | 5.20208E-04 | 2.35E-05 | 0 |
R/H | rs376012117 | -2.305 | 0.169 | N | 0.262 | 0.193 | 0.21737058555 | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 3.77216E-04 | 0 | 1.47E-05 | 0 | 0 |
R/H | rs376012117 | -2.305 | 0.169 | N | 0.262 | 0.193 | 0.21737058555 | gnomAD-4.0.0 | 3.59504E-05 | None | None | None | None | N | None | 1.33337E-05 | 1.66828E-05 | None | 0 | 4.46588E-05 | None | 4.84587E-04 | 0 | 1.61071E-05 | 1.09842E-05 | 4.80415E-05 |
R/L | rs376012117 | -0.754 | 0.967 | N | 0.541 | 0.301 | 0.602001837285 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.9E-06 | 0 |
R/L | rs376012117 | -0.754 | 0.967 | N | 0.541 | 0.301 | 0.602001837285 | gnomAD-4.0.0 | 2.05315E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79918E-06 | 1.15988E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4147 | ambiguous | 0.465 | ambiguous | -1.818 | Destabilizing | 0.863 | D | 0.422 | neutral | None | None | None | None | N |
R/C | 0.1121 | likely_benign | 0.1157 | benign | -1.741 | Destabilizing | 0.079 | N | 0.367 | neutral | N | 0.466410478 | None | None | N |
R/D | 0.777 | likely_pathogenic | 0.8232 | pathogenic | -0.423 | Destabilizing | 0.969 | D | 0.567 | neutral | None | None | None | None | N |
R/E | 0.4813 | ambiguous | 0.5573 | ambiguous | -0.217 | Destabilizing | 0.939 | D | 0.457 | neutral | None | None | None | None | N |
R/F | 0.341 | ambiguous | 0.4093 | ambiguous | -1.231 | Destabilizing | 0.991 | D | 0.595 | neutral | None | None | None | None | N |
R/G | 0.3025 | likely_benign | 0.3527 | ambiguous | -2.186 | Highly Destabilizing | 0.983 | D | 0.537 | neutral | N | 0.482387874 | None | None | N |
R/H | 0.1114 | likely_benign | 0.1122 | benign | -2.043 | Highly Destabilizing | 0.169 | N | 0.262 | neutral | N | 0.506120872 | None | None | N |
R/I | 0.1884 | likely_benign | 0.2174 | benign | -0.768 | Destabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | N |
R/K | 0.1617 | likely_benign | 0.1613 | benign | -1.225 | Destabilizing | 0.927 | D | 0.484 | neutral | None | None | None | None | N |
R/L | 0.1836 | likely_benign | 0.2157 | benign | -0.768 | Destabilizing | 0.967 | D | 0.541 | neutral | N | 0.515065642 | None | None | N |
R/M | 0.269 | likely_benign | 0.3006 | benign | -1.171 | Destabilizing | 0.997 | D | 0.513 | neutral | None | None | None | None | N |
R/N | 0.5832 | likely_pathogenic | 0.6544 | pathogenic | -1.037 | Destabilizing | 0.939 | D | 0.477 | neutral | None | None | None | None | N |
R/P | 0.8058 | likely_pathogenic | 0.8436 | pathogenic | -1.104 | Destabilizing | 0.998 | D | 0.582 | neutral | N | 0.494669232 | None | None | N |
R/Q | 0.1189 | likely_benign | 0.1293 | benign | -1.06 | Destabilizing | 0.991 | D | 0.489 | neutral | None | None | None | None | N |
R/S | 0.4859 | ambiguous | 0.5345 | ambiguous | -2.105 | Highly Destabilizing | 0.983 | D | 0.522 | neutral | N | 0.490123328 | None | None | N |
R/T | 0.2553 | likely_benign | 0.2885 | benign | -1.668 | Destabilizing | 0.969 | D | 0.493 | neutral | None | None | None | None | N |
R/V | 0.2409 | likely_benign | 0.2689 | benign | -1.104 | Destabilizing | 0.939 | D | 0.569 | neutral | None | None | None | None | N |
R/W | 0.1199 | likely_benign | 0.136 | benign | -0.642 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | N |
R/Y | 0.2082 | likely_benign | 0.2558 | benign | -0.501 | Destabilizing | 0.982 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.