Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6059 | 18400;18401;18402 | chr2:178730225;178730224;178730223 | chr2:179594952;179594951;179594950 |
N2AB | 5742 | 17449;17450;17451 | chr2:178730225;178730224;178730223 | chr2:179594952;179594951;179594950 |
N2A | 4815 | 14668;14669;14670 | chr2:178730225;178730224;178730223 | chr2:179594952;179594951;179594950 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.978 | N | 0.491 | 0.318 | 0.681597050132 | gnomAD-4.0.0 | 2.05306E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.82907E-05 | 0 | None | 0 | 0 | 1.79911E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1023 | likely_benign | 0.1049 | benign | -0.925 | Destabilizing | 0.973 | D | 0.338 | neutral | N | 0.487748542 | None | None | N |
S/C | 0.1907 | likely_benign | 0.2075 | benign | -0.641 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
S/D | 0.5846 | likely_pathogenic | 0.6905 | pathogenic | 0.187 | Stabilizing | 1.0 | D | 0.521 | neutral | None | None | None | None | N |
S/E | 0.6618 | likely_pathogenic | 0.7434 | pathogenic | 0.179 | Stabilizing | 0.999 | D | 0.469 | neutral | None | None | None | None | N |
S/F | 0.2593 | likely_benign | 0.2488 | benign | -1.149 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/G | 0.1716 | likely_benign | 0.1888 | benign | -1.142 | Destabilizing | 0.999 | D | 0.41 | neutral | None | None | None | None | N |
S/H | 0.4202 | ambiguous | 0.4646 | ambiguous | -1.482 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
S/I | 0.2238 | likely_benign | 0.2572 | benign | -0.45 | Destabilizing | 0.983 | D | 0.534 | neutral | None | None | None | None | N |
S/K | 0.7469 | likely_pathogenic | 0.8322 | pathogenic | -0.479 | Destabilizing | 0.999 | D | 0.472 | neutral | None | None | None | None | N |
S/L | 0.1248 | likely_benign | 0.1361 | benign | -0.45 | Destabilizing | 0.978 | D | 0.491 | neutral | N | 0.491327565 | None | None | N |
S/M | 0.2495 | likely_benign | 0.2594 | benign | -0.203 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
S/N | 0.1951 | likely_benign | 0.2441 | benign | -0.385 | Destabilizing | 1.0 | D | 0.53 | neutral | None | None | None | None | N |
S/P | 0.8599 | likely_pathogenic | 0.8976 | pathogenic | -0.577 | Destabilizing | 0.999 | D | 0.675 | neutral | N | 0.489962425 | None | None | N |
S/Q | 0.5964 | likely_pathogenic | 0.6499 | pathogenic | -0.587 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
S/R | 0.6449 | likely_pathogenic | 0.7377 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
S/T | 0.1133 | likely_benign | 0.1239 | benign | -0.546 | Destabilizing | 0.989 | D | 0.42 | neutral | N | 0.495098589 | None | None | N |
S/V | 0.2281 | likely_benign | 0.2491 | benign | -0.577 | Destabilizing | 0.611 | D | 0.37 | neutral | None | None | None | None | N |
S/W | 0.4076 | ambiguous | 0.3839 | ambiguous | -1.016 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/Y | 0.2111 | likely_benign | 0.2036 | benign | -0.777 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.