Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6070 | 18433;18434;18435 | chr2:178730192;178730191;178730190 | chr2:179594919;179594918;179594917 |
N2AB | 5753 | 17482;17483;17484 | chr2:178730192;178730191;178730190 | chr2:179594919;179594918;179594917 |
N2A | 4826 | 14701;14702;14703 | chr2:178730192;178730191;178730190 | chr2:179594919;179594918;179594917 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1238374094 | -0.931 | 1.0 | N | 0.577 | 0.293 | 0.327952845175 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1238374094 | -0.931 | 1.0 | N | 0.577 | 0.293 | 0.327952845175 | gnomAD-4.0.0 | 1.59202E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77886E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3829 | ambiguous | 0.414 | ambiguous | -1.256 | Destabilizing | 0.767 | D | 0.376 | neutral | N | 0.488997693 | None | None | N |
E/C | 0.9479 | likely_pathogenic | 0.9508 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/D | 0.4423 | ambiguous | 0.4709 | ambiguous | -1.484 | Destabilizing | 0.998 | D | 0.417 | neutral | N | 0.486644289 | None | None | N |
E/F | 0.8609 | likely_pathogenic | 0.8735 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/G | 0.6121 | likely_pathogenic | 0.6692 | pathogenic | -1.669 | Destabilizing | 0.996 | D | 0.572 | neutral | N | 0.50178603 | None | None | N |
E/H | 0.7257 | likely_pathogenic | 0.7405 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
E/I | 0.5206 | ambiguous | 0.5364 | ambiguous | -0.095 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/K | 0.5343 | ambiguous | 0.5884 | pathogenic | -0.983 | Destabilizing | 0.998 | D | 0.427 | neutral | N | 0.508411816 | None | None | N |
E/L | 0.6206 | likely_pathogenic | 0.6356 | pathogenic | -0.095 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/M | 0.6672 | likely_pathogenic | 0.6861 | pathogenic | 0.527 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/N | 0.6926 | likely_pathogenic | 0.7271 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
E/P | 0.991 | likely_pathogenic | 0.9932 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/Q | 0.2557 | likely_benign | 0.2649 | benign | -1.212 | Destabilizing | 1.0 | D | 0.577 | neutral | N | 0.507315738 | None | None | N |
E/R | 0.6399 | likely_pathogenic | 0.6707 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
E/S | 0.5089 | ambiguous | 0.5433 | ambiguous | -1.944 | Destabilizing | 0.994 | D | 0.419 | neutral | None | None | None | None | N |
E/T | 0.474 | ambiguous | 0.5168 | ambiguous | -1.566 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
E/V | 0.3261 | likely_benign | 0.341 | ambiguous | -0.464 | Destabilizing | 0.999 | D | 0.662 | neutral | N | 0.504294075 | None | None | N |
E/W | 0.954 | likely_pathogenic | 0.9589 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/Y | 0.798 | likely_pathogenic | 0.8094 | pathogenic | -0.507 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.