Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6071 | 18436;18437;18438 | chr2:178730189;178730188;178730187 | chr2:179594916;179594915;179594914 |
N2AB | 5754 | 17485;17486;17487 | chr2:178730189;178730188;178730187 | chr2:179594916;179594915;179594914 |
N2A | 4827 | 14704;14705;14706 | chr2:178730189;178730188;178730187 | chr2:179594916;179594915;179594914 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.928 | D | 0.884 | 0.735 | 0.863873001299 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8667 | likely_pathogenic | 0.8724 | pathogenic | -2.858 | Highly Destabilizing | 0.547 | D | 0.693 | prob.neutral | None | None | None | None | N |
L/C | 0.7911 | likely_pathogenic | 0.7891 | pathogenic | -2.073 | Highly Destabilizing | 0.985 | D | 0.784 | deleterious | None | None | None | None | N |
L/D | 0.9803 | likely_pathogenic | 0.9791 | pathogenic | -3.377 | Highly Destabilizing | 0.981 | D | 0.893 | deleterious | None | None | None | None | N |
L/E | 0.9477 | likely_pathogenic | 0.9485 | pathogenic | -3.111 | Highly Destabilizing | 0.945 | D | 0.89 | deleterious | None | None | None | None | N |
L/F | 0.1676 | likely_benign | 0.1516 | benign | -1.675 | Destabilizing | 0.864 | D | 0.763 | deleterious | D | 0.533656977 | None | None | N |
L/G | 0.9547 | likely_pathogenic | 0.9542 | pathogenic | -3.435 | Highly Destabilizing | 0.945 | D | 0.889 | deleterious | None | None | None | None | N |
L/H | 0.7941 | likely_pathogenic | 0.7644 | pathogenic | -2.874 | Highly Destabilizing | 0.993 | D | 0.865 | deleterious | D | 0.540960735 | None | None | N |
L/I | 0.0795 | likely_benign | 0.0831 | benign | -1.158 | Destabilizing | 0.024 | N | 0.353 | neutral | N | 0.423584341 | None | None | N |
L/K | 0.9208 | likely_pathogenic | 0.9121 | pathogenic | -2.336 | Highly Destabilizing | 0.945 | D | 0.879 | deleterious | None | None | None | None | N |
L/M | 0.1923 | likely_benign | 0.1846 | benign | -1.126 | Destabilizing | 0.894 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/N | 0.9088 | likely_pathogenic | 0.9074 | pathogenic | -2.799 | Highly Destabilizing | 0.981 | D | 0.899 | deleterious | None | None | None | None | N |
L/P | 0.9678 | likely_pathogenic | 0.9635 | pathogenic | -1.71 | Destabilizing | 0.975 | D | 0.894 | deleterious | D | 0.52960443 | None | None | N |
L/Q | 0.8357 | likely_pathogenic | 0.8232 | pathogenic | -2.604 | Highly Destabilizing | 0.981 | D | 0.892 | deleterious | None | None | None | None | N |
L/R | 0.8589 | likely_pathogenic | 0.8425 | pathogenic | -2.043 | Highly Destabilizing | 0.928 | D | 0.884 | deleterious | D | 0.540960735 | None | None | N |
L/S | 0.929 | likely_pathogenic | 0.9321 | pathogenic | -3.466 | Highly Destabilizing | 0.894 | D | 0.885 | deleterious | None | None | None | None | N |
L/T | 0.86 | likely_pathogenic | 0.8689 | pathogenic | -3.054 | Highly Destabilizing | 0.894 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.1538 | likely_benign | 0.1607 | benign | -1.71 | Destabilizing | 0.006 | N | 0.339 | neutral | N | 0.486364346 | None | None | N |
L/W | 0.5418 | ambiguous | 0.4809 | ambiguous | -2.115 | Highly Destabilizing | 0.995 | D | 0.849 | deleterious | None | None | None | None | N |
L/Y | 0.5717 | likely_pathogenic | 0.5347 | ambiguous | -1.86 | Destabilizing | 0.945 | D | 0.8 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.