Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6074 | 18445;18446;18447 | chr2:178730180;178730179;178730178 | chr2:179594907;179594906;179594905 |
N2AB | 5757 | 17494;17495;17496 | chr2:178730180;178730179;178730178 | chr2:179594907;179594906;179594905 |
N2A | 4830 | 14713;14714;14715 | chr2:178730180;178730179;178730178 | chr2:179594907;179594906;179594905 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.031 | N | 0.397 | 0.171 | 0.326881540566 | gnomAD-4.0.0 | 1.36873E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7991E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5737 | likely_pathogenic | 0.5728 | pathogenic | -1.748 | Destabilizing | 0.973 | D | 0.613 | neutral | None | None | None | None | N |
A/D | 0.9229 | likely_pathogenic | 0.9331 | pathogenic | -2.709 | Highly Destabilizing | 0.879 | D | 0.693 | prob.neutral | N | 0.508528115 | None | None | N |
A/E | 0.8661 | likely_pathogenic | 0.8841 | pathogenic | -2.625 | Highly Destabilizing | 0.906 | D | 0.667 | neutral | None | None | None | None | N |
A/F | 0.8134 | likely_pathogenic | 0.8191 | pathogenic | -1.13 | Destabilizing | 0.826 | D | 0.677 | prob.neutral | None | None | None | None | N |
A/G | 0.2806 | likely_benign | 0.2896 | benign | -1.641 | Destabilizing | 0.674 | D | 0.563 | neutral | N | 0.515022575 | None | None | N |
A/H | 0.9501 | likely_pathogenic | 0.9528 | pathogenic | -1.758 | Destabilizing | 0.991 | D | 0.663 | neutral | None | None | None | None | N |
A/I | 0.3462 | ambiguous | 0.3319 | benign | -0.4 | Destabilizing | 0.189 | N | 0.585 | neutral | None | None | None | None | N |
A/K | 0.9451 | likely_pathogenic | 0.9514 | pathogenic | -1.535 | Destabilizing | 0.906 | D | 0.665 | neutral | None | None | None | None | N |
A/L | 0.3192 | likely_benign | 0.3099 | benign | -0.4 | Destabilizing | 0.004 | N | 0.441 | neutral | None | None | None | None | N |
A/M | 0.4344 | ambiguous | 0.4416 | ambiguous | -0.606 | Destabilizing | 0.826 | D | 0.659 | neutral | None | None | None | None | N |
A/N | 0.7832 | likely_pathogenic | 0.8085 | pathogenic | -1.698 | Destabilizing | 0.906 | D | 0.683 | prob.neutral | None | None | None | None | N |
A/P | 0.4711 | ambiguous | 0.4852 | ambiguous | -0.656 | Destabilizing | 0.957 | D | 0.685 | prob.neutral | N | 0.503919759 | None | None | N |
A/Q | 0.8649 | likely_pathogenic | 0.8716 | pathogenic | -1.743 | Destabilizing | 0.967 | D | 0.659 | neutral | None | None | None | None | N |
A/R | 0.9053 | likely_pathogenic | 0.9119 | pathogenic | -1.301 | Destabilizing | 0.906 | D | 0.683 | prob.neutral | None | None | None | None | N |
A/S | 0.1598 | likely_benign | 0.163 | benign | -2.047 | Highly Destabilizing | 0.338 | N | 0.531 | neutral | N | 0.493689089 | None | None | N |
A/T | 0.0932 | likely_benign | 0.1035 | benign | -1.862 | Destabilizing | 0.031 | N | 0.397 | neutral | N | 0.510590903 | None | None | N |
A/V | 0.124 | likely_benign | 0.1121 | benign | -0.656 | Destabilizing | 0.003 | N | 0.404 | neutral | N | 0.407399459 | None | None | N |
A/W | 0.9732 | likely_pathogenic | 0.9745 | pathogenic | -1.66 | Destabilizing | 0.991 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/Y | 0.9344 | likely_pathogenic | 0.9373 | pathogenic | -1.22 | Destabilizing | 0.906 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.