Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6118 | 18577;18578;18579 | chr2:178729901;178729900;178729899 | chr2:179594628;179594627;179594626 |
N2AB | 5801 | 17626;17627;17628 | chr2:178729901;178729900;178729899 | chr2:179594628;179594627;179594626 |
N2A | 4874 | 14845;14846;14847 | chr2:178729901;178729900;178729899 | chr2:179594628;179594627;179594626 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs2154307652 | None | 0.003 | N | 0.352 | 0.1 | 0.279370189704 | gnomAD-4.0.0 | 1.59235E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78087E-05 | None | 0 | 0 | 0 | 0 | 0 |
R/S | None | None | 0.565 | N | 0.577 | 0.196 | 0.225215365344 | gnomAD-4.0.0 | 3.18468E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86632E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3937 | ambiguous | 0.3802 | ambiguous | 0.115 | Stabilizing | 0.633 | D | 0.567 | neutral | None | None | None | None | I |
R/C | 0.2254 | likely_benign | 0.2299 | benign | -0.103 | Destabilizing | 0.996 | D | 0.668 | neutral | None | None | None | None | I |
R/D | 0.6505 | likely_pathogenic | 0.6357 | pathogenic | -0.147 | Destabilizing | 0.923 | D | 0.567 | neutral | None | None | None | None | I |
R/E | 0.3006 | likely_benign | 0.2926 | benign | -0.081 | Destabilizing | 0.633 | D | 0.549 | neutral | None | None | None | None | I |
R/F | 0.5887 | likely_pathogenic | 0.5914 | pathogenic | -0.102 | Destabilizing | 0.987 | D | 0.623 | neutral | None | None | None | None | I |
R/G | 0.2344 | likely_benign | 0.2185 | benign | -0.072 | Destabilizing | 0.722 | D | 0.563 | neutral | D | 0.524824063 | None | None | I |
R/H | 0.1262 | likely_benign | 0.1287 | benign | -0.609 | Destabilizing | 0.961 | D | 0.508 | neutral | None | None | None | None | I |
R/I | 0.3018 | likely_benign | 0.3113 | benign | 0.572 | Stabilizing | 0.961 | D | 0.625 | neutral | None | None | None | None | I |
R/K | 0.1067 | likely_benign | 0.1045 | benign | 0.006 | Stabilizing | 0.003 | N | 0.352 | neutral | N | 0.405919379 | None | None | I |
R/L | 0.2398 | likely_benign | 0.2343 | benign | 0.572 | Stabilizing | 0.775 | D | 0.563 | neutral | None | None | None | None | I |
R/M | 0.2866 | likely_benign | 0.2868 | benign | 0.047 | Stabilizing | 0.995 | D | 0.532 | neutral | N | 0.500389765 | None | None | I |
R/N | 0.5727 | likely_pathogenic | 0.564 | pathogenic | 0.145 | Stabilizing | 0.923 | D | 0.501 | neutral | None | None | None | None | I |
R/P | 0.4317 | ambiguous | 0.4036 | ambiguous | 0.44 | Stabilizing | 0.961 | D | 0.605 | neutral | None | None | None | None | I |
R/Q | 0.096 | likely_benign | 0.0955 | benign | 0.098 | Stabilizing | 0.858 | D | 0.519 | neutral | None | None | None | None | I |
R/S | 0.4758 | ambiguous | 0.4592 | ambiguous | -0.103 | Destabilizing | 0.565 | D | 0.577 | neutral | N | 0.475624607 | None | None | I |
R/T | 0.2615 | likely_benign | 0.2573 | benign | 0.092 | Stabilizing | 0.722 | D | 0.53 | neutral | N | 0.464871682 | None | None | I |
R/V | 0.3875 | ambiguous | 0.3938 | ambiguous | 0.44 | Stabilizing | 0.923 | D | 0.619 | neutral | None | None | None | None | I |
R/W | 0.1616 | likely_benign | 0.1625 | benign | -0.221 | Destabilizing | 0.995 | D | 0.673 | neutral | D | 0.533502261 | None | None | I |
R/Y | 0.382 | ambiguous | 0.381 | ambiguous | 0.195 | Stabilizing | 0.987 | D | 0.609 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.