Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC611818577;18578;18579 chr2:178729901;178729900;178729899chr2:179594628;179594627;179594626
N2AB580117626;17627;17628 chr2:178729901;178729900;178729899chr2:179594628;179594627;179594626
N2A487414845;14846;14847 chr2:178729901;178729900;178729899chr2:179594628;179594627;179594626
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: AGG
  • RefSeq wild type template codon: TCC
  • Domain: Ig-45
  • Domain position: 14
  • Structural Position: 18
  • Q(SASA): 0.7211
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/K rs2154307652 None 0.003 N 0.352 0.1 0.279370189704 gnomAD-4.0.0 1.59235E-06 None None None None I None 0 0 None 0 2.78087E-05 None 0 0 0 0 0
R/S None None 0.565 N 0.577 0.196 0.225215365344 gnomAD-4.0.0 3.18468E-06 None None None None I None 0 0 None 0 0 None 0 0 0 2.86632E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.3937 ambiguous 0.3802 ambiguous 0.115 Stabilizing 0.633 D 0.567 neutral None None None None I
R/C 0.2254 likely_benign 0.2299 benign -0.103 Destabilizing 0.996 D 0.668 neutral None None None None I
R/D 0.6505 likely_pathogenic 0.6357 pathogenic -0.147 Destabilizing 0.923 D 0.567 neutral None None None None I
R/E 0.3006 likely_benign 0.2926 benign -0.081 Destabilizing 0.633 D 0.549 neutral None None None None I
R/F 0.5887 likely_pathogenic 0.5914 pathogenic -0.102 Destabilizing 0.987 D 0.623 neutral None None None None I
R/G 0.2344 likely_benign 0.2185 benign -0.072 Destabilizing 0.722 D 0.563 neutral D 0.524824063 None None I
R/H 0.1262 likely_benign 0.1287 benign -0.609 Destabilizing 0.961 D 0.508 neutral None None None None I
R/I 0.3018 likely_benign 0.3113 benign 0.572 Stabilizing 0.961 D 0.625 neutral None None None None I
R/K 0.1067 likely_benign 0.1045 benign 0.006 Stabilizing 0.003 N 0.352 neutral N 0.405919379 None None I
R/L 0.2398 likely_benign 0.2343 benign 0.572 Stabilizing 0.775 D 0.563 neutral None None None None I
R/M 0.2866 likely_benign 0.2868 benign 0.047 Stabilizing 0.995 D 0.532 neutral N 0.500389765 None None I
R/N 0.5727 likely_pathogenic 0.564 pathogenic 0.145 Stabilizing 0.923 D 0.501 neutral None None None None I
R/P 0.4317 ambiguous 0.4036 ambiguous 0.44 Stabilizing 0.961 D 0.605 neutral None None None None I
R/Q 0.096 likely_benign 0.0955 benign 0.098 Stabilizing 0.858 D 0.519 neutral None None None None I
R/S 0.4758 ambiguous 0.4592 ambiguous -0.103 Destabilizing 0.565 D 0.577 neutral N 0.475624607 None None I
R/T 0.2615 likely_benign 0.2573 benign 0.092 Stabilizing 0.722 D 0.53 neutral N 0.464871682 None None I
R/V 0.3875 ambiguous 0.3938 ambiguous 0.44 Stabilizing 0.923 D 0.619 neutral None None None None I
R/W 0.1616 likely_benign 0.1625 benign -0.221 Destabilizing 0.995 D 0.673 neutral D 0.533502261 None None I
R/Y 0.382 ambiguous 0.381 ambiguous 0.195 Stabilizing 0.987 D 0.609 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.