Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6149 | 18670;18671;18672 | chr2:178729808;178729807;178729806 | chr2:179594535;179594534;179594533 |
N2AB | 5832 | 17719;17720;17721 | chr2:178729808;178729807;178729806 | chr2:179594535;179594534;179594533 |
N2A | 4905 | 14938;14939;14940 | chr2:178729808;178729807;178729806 | chr2:179594535;179594534;179594533 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs368897297 | -0.311 | None | N | 0.118 | 0.121 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.13E-05 | None | 0 | None | 0 | 2.34E-05 | 0 |
I/V | rs368897297 | -0.311 | None | N | 0.118 | 0.121 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 2.06868E-04 | 0 |
I/V | rs368897297 | -0.311 | None | N | 0.118 | 0.121 | None | gnomAD-4.0.0 | 3.03638E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23005E-05 | None | 0 | 0 | 3.98394E-05 | 1.09786E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.0963 | likely_benign | 0.0961 | benign | -0.718 | Destabilizing | None | N | 0.156 | neutral | None | None | None | None | N |
I/C | 0.4112 | ambiguous | 0.4113 | ambiguous | -0.582 | Destabilizing | 0.245 | N | 0.225 | neutral | None | None | None | None | N |
I/D | 0.1607 | likely_benign | 0.1554 | benign | -0.207 | Destabilizing | 0.009 | N | 0.271 | neutral | None | None | None | None | N |
I/E | 0.1484 | likely_benign | 0.1471 | benign | -0.285 | Destabilizing | None | N | 0.205 | neutral | None | None | None | None | N |
I/F | 0.0738 | likely_benign | 0.076 | benign | -0.685 | Destabilizing | 0.017 | N | 0.221 | neutral | N | 0.482172151 | None | None | N |
I/G | 0.1937 | likely_benign | 0.192 | benign | -0.914 | Destabilizing | 0.004 | N | 0.295 | neutral | None | None | None | None | N |
I/H | 0.1649 | likely_benign | 0.1701 | benign | -0.29 | Destabilizing | None | N | 0.241 | neutral | None | None | None | None | N |
I/K | 0.1079 | likely_benign | 0.1089 | benign | -0.42 | Destabilizing | 0.009 | N | 0.259 | neutral | None | None | None | None | N |
I/L | 0.0633 | likely_benign | 0.066 | benign | -0.315 | Destabilizing | None | N | 0.119 | neutral | N | 0.4336102 | None | None | N |
I/M | 0.0713 | likely_benign | 0.0711 | benign | -0.344 | Destabilizing | 0.001 | N | 0.197 | neutral | N | 0.46358639 | None | None | N |
I/N | 0.0746 | likely_benign | 0.0728 | benign | -0.179 | Destabilizing | 0.014 | N | 0.3 | neutral | N | 0.354031908 | None | None | N |
I/P | 0.1393 | likely_benign | 0.1445 | benign | -0.416 | Destabilizing | 0.085 | N | 0.388 | neutral | None | None | None | None | N |
I/Q | 0.1238 | likely_benign | 0.1248 | benign | -0.383 | Destabilizing | 0.001 | N | 0.261 | neutral | None | None | None | None | N |
I/R | 0.083 | likely_benign | 0.0844 | benign | 0.093 | Stabilizing | 0.009 | N | 0.375 | neutral | None | None | None | None | N |
I/S | 0.0818 | likely_benign | 0.0789 | benign | -0.648 | Destabilizing | None | N | 0.124 | neutral | N | 0.272181316 | None | None | N |
I/T | 0.0876 | likely_benign | 0.083 | benign | -0.612 | Destabilizing | None | N | 0.185 | neutral | N | 0.368828002 | None | None | N |
I/V | 0.0657 | likely_benign | 0.0644 | benign | -0.416 | Destabilizing | None | N | 0.118 | neutral | N | 0.425798793 | None | None | N |
I/W | 0.3529 | ambiguous | 0.364 | ambiguous | -0.733 | Destabilizing | 0.788 | D | 0.323 | neutral | None | None | None | None | N |
I/Y | 0.1946 | likely_benign | 0.2081 | benign | -0.469 | Destabilizing | 0.044 | N | 0.336 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.