Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6152 | 18679;18680;18681 | chr2:178729799;178729798;178729797 | chr2:179594526;179594525;179594524 |
N2AB | 5835 | 17728;17729;17730 | chr2:178729799;178729798;178729797 | chr2:179594526;179594525;179594524 |
N2A | 4908 | 14947;14948;14949 | chr2:178729799;178729798;178729797 | chr2:179594526;179594525;179594524 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs2080071193 | None | 0.062 | N | 0.573 | 0.251 | 0.482209950775 | gnomAD-4.0.0 | 3.18298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54877E-05 | None | 0 | 0 | 0 | 0 | 0 |
H/R | None | None | 0.117 | N | 0.553 | 0.28 | 0.270889551736 | gnomAD-4.0.0 | 1.59149E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.171 | likely_benign | 0.1684 | benign | -1.548 | Destabilizing | 0.149 | N | 0.528 | neutral | None | None | None | None | N |
H/C | 0.1374 | likely_benign | 0.1336 | benign | -0.738 | Destabilizing | 0.935 | D | 0.605 | neutral | None | None | None | None | N |
H/D | 0.1222 | likely_benign | 0.1127 | benign | -1.258 | Destabilizing | 0.211 | N | 0.561 | neutral | N | 0.501024484 | None | None | N |
H/E | 0.1654 | likely_benign | 0.16 | benign | -1.071 | Destabilizing | 0.262 | N | 0.528 | neutral | None | None | None | None | N |
H/F | 0.1725 | likely_benign | 0.1808 | benign | 0.262 | Stabilizing | 0.081 | N | 0.521 | neutral | None | None | None | None | N |
H/G | 0.1797 | likely_benign | 0.1717 | benign | -1.986 | Destabilizing | 0.262 | N | 0.542 | neutral | None | None | None | None | N |
H/I | 0.2174 | likely_benign | 0.222 | benign | -0.267 | Destabilizing | 0.38 | N | 0.617 | neutral | None | None | None | None | N |
H/K | 0.1814 | likely_benign | 0.1742 | benign | -0.883 | Destabilizing | 0.149 | N | 0.537 | neutral | None | None | None | None | N |
H/L | 0.106 | likely_benign | 0.107 | benign | -0.267 | Destabilizing | 0.062 | N | 0.573 | neutral | N | 0.492055497 | None | None | N |
H/M | 0.3374 | likely_benign | 0.3348 | benign | -0.515 | Destabilizing | 0.555 | D | 0.567 | neutral | None | None | None | None | N |
H/N | 0.0754 | likely_benign | 0.0738 | benign | -1.515 | Destabilizing | 0.211 | N | 0.565 | neutral | D | 0.530480599 | None | None | N |
H/P | 0.1357 | likely_benign | 0.1229 | benign | -0.681 | Destabilizing | 0.741 | D | 0.589 | neutral | N | 0.504795507 | None | None | N |
H/Q | 0.1155 | likely_benign | 0.1158 | benign | -1.161 | Destabilizing | 0.484 | N | 0.573 | neutral | N | 0.514588427 | None | None | N |
H/R | 0.0927 | likely_benign | 0.0945 | benign | -1.178 | Destabilizing | 0.117 | N | 0.553 | neutral | N | 0.477243547 | None | None | N |
H/S | 0.1414 | likely_benign | 0.1384 | benign | -1.669 | Destabilizing | 0.149 | N | 0.525 | neutral | None | None | None | None | N |
H/T | 0.1569 | likely_benign | 0.1539 | benign | -1.351 | Destabilizing | 0.149 | N | 0.548 | neutral | None | None | None | None | N |
H/V | 0.1851 | likely_benign | 0.1861 | benign | -0.681 | Destabilizing | 0.149 | N | 0.597 | neutral | None | None | None | None | N |
H/W | 0.2345 | likely_benign | 0.2364 | benign | 0.904 | Stabilizing | 0.555 | D | 0.567 | neutral | None | None | None | None | N |
H/Y | 0.056 | likely_benign | 0.057 | benign | 0.728 | Stabilizing | None | N | 0.16 | neutral | N | 0.373017527 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.