Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6153 | 18682;18683;18684 | chr2:178729796;178729795;178729794 | chr2:179594523;179594522;179594521 |
N2AB | 5836 | 17731;17732;17733 | chr2:178729796;178729795;178729794 | chr2:179594523;179594522;179594521 |
N2A | 4909 | 14950;14951;14952 | chr2:178729796;178729795;178729794 | chr2:179594523;179594522;179594521 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs374460910 | -0.924 | 0.896 | N | 0.472 | 0.342 | None | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 9.95E-05 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
G/D | rs374460910 | -0.924 | 0.896 | N | 0.472 | 0.342 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/D | rs374460910 | -0.924 | 0.896 | N | 0.472 | 0.342 | None | gnomAD-4.0.0 | 1.11553E-05 | None | None | None | None | I | None | 0 | 1.66778E-05 | None | 3.37883E-05 | 0 | None | 0 | 0 | 1.18671E-05 | 0 | 3.20246E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0969 | likely_benign | 0.105 | benign | -0.537 | Destabilizing | 0.78 | D | 0.434 | neutral | N | 0.45288382 | None | None | I |
G/C | 0.1901 | likely_benign | 0.185 | benign | -0.96 | Destabilizing | 0.999 | D | 0.66 | neutral | D | 0.532115395 | None | None | I |
G/D | 0.1271 | likely_benign | 0.1249 | benign | -0.259 | Destabilizing | 0.896 | D | 0.472 | neutral | N | 0.46427425 | None | None | I |
G/E | 0.1174 | likely_benign | 0.1242 | benign | -0.341 | Destabilizing | 0.851 | D | 0.487 | neutral | None | None | None | None | I |
G/F | 0.3565 | ambiguous | 0.4063 | ambiguous | -0.985 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | I |
G/H | 0.1864 | likely_benign | 0.2022 | benign | -0.984 | Destabilizing | 0.997 | D | 0.607 | neutral | None | None | None | None | I |
G/I | 0.172 | likely_benign | 0.1825 | benign | -0.284 | Destabilizing | 0.988 | D | 0.651 | neutral | None | None | None | None | I |
G/K | 0.1817 | likely_benign | 0.1992 | benign | -0.793 | Destabilizing | 0.132 | N | 0.288 | neutral | None | None | None | None | I |
G/L | 0.25 | likely_benign | 0.2835 | benign | -0.284 | Destabilizing | 0.976 | D | 0.551 | neutral | None | None | None | None | I |
G/M | 0.2998 | likely_benign | 0.3309 | benign | -0.363 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
G/N | 0.1637 | likely_benign | 0.169 | benign | -0.485 | Destabilizing | 0.919 | D | 0.449 | neutral | None | None | None | None | I |
G/P | 0.5498 | ambiguous | 0.5748 | pathogenic | -0.329 | Destabilizing | 0.996 | D | 0.593 | neutral | None | None | None | None | I |
G/Q | 0.156 | likely_benign | 0.1743 | benign | -0.652 | Destabilizing | 0.507 | D | 0.353 | neutral | None | None | None | None | I |
G/R | 0.1223 | likely_benign | 0.1343 | benign | -0.564 | Destabilizing | 0.059 | N | 0.351 | neutral | N | 0.359357583 | None | None | I |
G/S | 0.0824 | likely_benign | 0.0845 | benign | -0.848 | Destabilizing | 0.896 | D | 0.422 | neutral | N | 0.409997047 | None | None | I |
G/T | 0.1142 | likely_benign | 0.1196 | benign | -0.828 | Destabilizing | 0.988 | D | 0.517 | neutral | None | None | None | None | I |
G/V | 0.1323 | likely_benign | 0.142 | benign | -0.329 | Destabilizing | 0.984 | D | 0.571 | neutral | N | 0.449190154 | None | None | I |
G/W | 0.2559 | likely_benign | 0.2789 | benign | -1.235 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
G/Y | 0.2465 | likely_benign | 0.2665 | benign | -0.816 | Destabilizing | 0.996 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.