Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6166 | 18721;18722;18723 | chr2:178729757;178729756;178729755 | chr2:179594484;179594483;179594482 |
N2AB | 5849 | 17770;17771;17772 | chr2:178729757;178729756;178729755 | chr2:179594484;179594483;179594482 |
N2A | 4922 | 14989;14990;14991 | chr2:178729757;178729756;178729755 | chr2:179594484;179594483;179594482 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.047 | N | 0.173 | 0.105 | 0.208000267992 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0681 | likely_benign | 0.0686 | benign | -0.499 | Destabilizing | 0.047 | N | 0.173 | neutral | N | 0.494463871 | None | None | N |
S/C | 0.1268 | likely_benign | 0.1179 | benign | -0.312 | Destabilizing | 0.001 | N | 0.098 | neutral | D | 0.532656899 | None | None | N |
S/D | 0.1618 | likely_benign | 0.1655 | benign | 0.215 | Stabilizing | 0.418 | N | 0.237 | neutral | None | None | None | None | N |
S/E | 0.2222 | likely_benign | 0.235 | benign | 0.116 | Stabilizing | 0.418 | N | 0.235 | neutral | None | None | None | None | N |
S/F | 0.1127 | likely_benign | 0.114 | benign | -1.156 | Destabilizing | 0.794 | D | 0.492 | neutral | D | 0.529616594 | None | None | N |
S/G | 0.0818 | likely_benign | 0.0846 | benign | -0.585 | Destabilizing | 0.228 | N | 0.233 | neutral | None | None | None | None | N |
S/H | 0.159 | likely_benign | 0.166 | benign | -1.147 | Destabilizing | 0.94 | D | 0.4 | neutral | None | None | None | None | N |
S/I | 0.1064 | likely_benign | 0.1054 | benign | -0.401 | Destabilizing | 0.01 | N | 0.227 | neutral | None | None | None | None | N |
S/K | 0.2681 | likely_benign | 0.2775 | benign | -0.346 | Destabilizing | 0.418 | N | 0.241 | neutral | None | None | None | None | N |
S/L | 0.0756 | likely_benign | 0.0763 | benign | -0.401 | Destabilizing | 0.061 | N | 0.319 | neutral | None | None | None | None | N |
S/M | 0.1607 | likely_benign | 0.157 | benign | -0.053 | Destabilizing | 0.836 | D | 0.419 | neutral | None | None | None | None | N |
S/N | 0.0886 | likely_benign | 0.0877 | benign | -0.078 | Destabilizing | 0.418 | N | 0.251 | neutral | None | None | None | None | N |
S/P | 0.0883 | likely_benign | 0.0896 | benign | -0.408 | Destabilizing | 0.523 | D | 0.439 | neutral | N | 0.49344515 | None | None | N |
S/Q | 0.2378 | likely_benign | 0.2522 | benign | -0.379 | Destabilizing | 0.836 | D | 0.337 | neutral | None | None | None | None | N |
S/R | 0.1903 | likely_benign | 0.2076 | benign | -0.173 | Destabilizing | 0.418 | N | 0.464 | neutral | None | None | None | None | N |
S/T | 0.0669 | likely_benign | 0.0652 | benign | -0.226 | Destabilizing | None | N | 0.067 | neutral | N | 0.446248636 | None | None | N |
S/V | 0.1271 | likely_benign | 0.1258 | benign | -0.408 | Destabilizing | 0.129 | N | 0.341 | neutral | None | None | None | None | N |
S/W | 0.1607 | likely_benign | 0.1641 | benign | -1.113 | Destabilizing | 0.983 | D | 0.463 | neutral | None | None | None | None | N |
S/Y | 0.1086 | likely_benign | 0.1068 | benign | -0.839 | Destabilizing | 0.794 | D | 0.48 | neutral | N | 0.516071294 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.