Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6168 | 18727;18728;18729 | chr2:178729751;178729750;178729749 | chr2:179594478;179594477;179594476 |
N2AB | 5851 | 17776;17777;17778 | chr2:178729751;178729750;178729749 | chr2:179594478;179594477;179594476 |
N2A | 4924 | 14995;14996;14997 | chr2:178729751;178729750;178729749 | chr2:179594478;179594477;179594476 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs764768881 | -1.37 | 0.006 | N | 0.255 | 0.191 | 0.280181792013 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.91E-05 | 0 |
A/T | rs764768881 | -1.37 | 0.006 | N | 0.255 | 0.191 | 0.280181792013 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs764768881 | -1.37 | 0.006 | N | 0.255 | 0.191 | 0.280181792013 | gnomAD-4.0.0 | 2.16901E-05 | None | None | None | None | N | None | 1.33504E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88197E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5187 | ambiguous | 0.4956 | ambiguous | -1.737 | Destabilizing | 0.973 | D | 0.62 | neutral | None | None | None | None | N |
A/D | 0.5992 | likely_pathogenic | 0.6223 | pathogenic | -1.81 | Destabilizing | 0.505 | D | 0.653 | neutral | N | 0.519390668 | None | None | N |
A/E | 0.5347 | ambiguous | 0.5685 | pathogenic | -1.801 | Destabilizing | 0.404 | N | 0.641 | neutral | None | None | None | None | N |
A/F | 0.482 | ambiguous | 0.5265 | ambiguous | -1.35 | Destabilizing | 0.906 | D | 0.663 | neutral | None | None | None | None | N |
A/G | 0.1685 | likely_benign | 0.1883 | benign | -1.471 | Destabilizing | 0.174 | N | 0.537 | neutral | N | 0.519137178 | None | None | N |
A/H | 0.7543 | likely_pathogenic | 0.7773 | pathogenic | -1.412 | Destabilizing | 0.973 | D | 0.659 | neutral | None | None | None | None | N |
A/I | 0.2498 | likely_benign | 0.273 | benign | -0.596 | Destabilizing | 0.826 | D | 0.681 | prob.neutral | None | None | None | None | N |
A/K | 0.7932 | likely_pathogenic | 0.8132 | pathogenic | -1.319 | Destabilizing | 0.404 | N | 0.638 | neutral | None | None | None | None | N |
A/L | 0.2259 | likely_benign | 0.2457 | benign | -0.596 | Destabilizing | 0.575 | D | 0.599 | neutral | None | None | None | None | N |
A/M | 0.2823 | likely_benign | 0.3107 | benign | -0.741 | Destabilizing | 0.991 | D | 0.655 | neutral | None | None | None | None | N |
A/N | 0.4583 | ambiguous | 0.4878 | ambiguous | -1.298 | Destabilizing | 0.704 | D | 0.669 | neutral | None | None | None | None | N |
A/P | 0.3274 | likely_benign | 0.3475 | ambiguous | -0.76 | Destabilizing | 0.879 | D | 0.683 | prob.neutral | D | 0.538758939 | None | None | N |
A/Q | 0.6192 | likely_pathogenic | 0.6567 | pathogenic | -1.471 | Destabilizing | 0.826 | D | 0.687 | prob.neutral | None | None | None | None | N |
A/R | 0.7127 | likely_pathogenic | 0.7366 | pathogenic | -0.984 | Destabilizing | 0.826 | D | 0.678 | prob.neutral | None | None | None | None | N |
A/S | 0.1095 | likely_benign | 0.1176 | benign | -1.724 | Destabilizing | 0.001 | N | 0.245 | neutral | N | 0.520018463 | None | None | N |
A/T | 0.0978 | likely_benign | 0.105 | benign | -1.614 | Destabilizing | 0.006 | N | 0.255 | neutral | N | 0.492813219 | None | None | N |
A/V | 0.1231 | likely_benign | 0.1308 | benign | -0.76 | Destabilizing | 0.505 | D | 0.58 | neutral | N | 0.446725852 | None | None | N |
A/W | 0.8644 | likely_pathogenic | 0.8809 | pathogenic | -1.621 | Destabilizing | 0.991 | D | 0.673 | neutral | None | None | None | None | N |
A/Y | 0.6899 | likely_pathogenic | 0.7229 | pathogenic | -1.216 | Destabilizing | 0.906 | D | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.